Pseudomonas aeruginosa Pae_CF67.11p, ACO98_RS10850
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain Pae_CF67.11p CF67.11p_contig_10, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACATCGCCCTGGCCCAGCGCATGGCGCGCCGCGGCGACACCGTGGTGGTCACCGCCGGCGTGCCGTTCGGTCGCCCCGGCTCGACCAACATGCTGCGCAT CGAGACCGTGGCGCCGCCGCTGGGAGATCTCTGAAGCAACGAGTTCGGTCCGGCTCGCGCCGTCCCCCCGGGCATGCGGGTCGGGCCACCCTTGTCTCTC TCGGATGGATGGGGCCGGAAATACGGGGCCGCGTCTCCATCCATCCGGGAAAGACCTTCTTGTCGGACCATGGCCTCCCTCGCGCACTCCCATGCAGGCC ATGGACATTCAAGGCCTCCGGTTCAACTCCTGCCGGAGGTCTTTTTTTCTTCTTGGAACGCCCTGCATGCATGACCCTCGCCTGGCCTTCTCGTCCGGGG TGCGTCGCCTCCGCGCCAGACCCTACAATGACCGCCCCCGCCCCTCGCGCAGGCCTGGCATCTCCGTGCCTGCCGAGCGGCCCTTGCCGCACTGACCGCC
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| DNA Sequence for Gene |
>ACO98_RS10850
ATGCCCCTGCAATCTCTCCTCAATGCATCCCGAATCCTCCTGCGCGGCATCAGCCAGGTGTTCCTCCAGGGCGACCCACGCCTGGGCCTGGCCTGTCTGC TGGCGATCGCCGTCGGCGCGCCGCCGCTGCTCGCCGGCGCCCTCCTTGGCGGCGCCCTCGGCCCGTTGCTGGCGCGCCTGTTGCACTGCGCCGACAGCGA CATCGAGGCCGGGCTGTACGGCTACAACGCCGTGCTGATCGGCATGCTGCTGGCATTCCGCTTCGCCTGGTCGCCGGGGCTGGTGTCGCTGGTAGCGCTC GGCTGCCTGGCCAGCGTGGCGTTGCAGCGCCTGTTCCTGCATGGGCTGCGCCGACGCCGCTGGCTTCCGCCCTATACCCTGGGCTTCGTCCTCAACGGCT GGTGGCTGGTGCCCCTCGGCGCCTGGCTAGGCCTGGCCCCGGCGACCCATGGCGGCTGCTTCAGCTGCGCCTGGAGCGGCACGGCGGAGCTGGCGGCGCT AGCGCAGGGGATCGGCGAGATCATCTTCCTCGGTGAACCGCTGGCAGGGCTGCTGGTCTGGCTCGGCCTGCTGCTGGTCTCGCGTCCCTCCGCCGCCTGG GCCCTCGCCGGCGCCGCGGCCAGCCTGCCGCTGGCCTGGCTGCTGGGCTACGACTGGGCGAGCGCGCTCGCCGGGTTCTACGGCCTGAACGCCGCCCTTG CCGGGCTGGCCCTGGCCTTGCGCTACCGCAGCGTCTGGCCGCCACTGCTCGGCATGGGCCTGGCGGTGGCGCTGCAACCGCTGTTCGGCCTGCTCGGCCT GCCGGCGCTGACCGCACCGTTCATCCTCGCCTGCCTGCTCTGCATTGGCGGCGAGCGCCTTTACCTGCGCCTGGCCGGCAGCCTCGGCGCGCGCCTCGGC CGGCGGCGCTCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGGGGAACGCTGGCGCCGGCGGGCTAGTCTGGTAAGGTGCCGCATCCATCATCAGGAGCCACGATGAGCGCACCCGACAGCTGGCGCGAACGCCTCTAC ATCGTCATCTTCCAGACCGACACCCGCGACGGCCGGCGCTTCGACAGCGCGCTGCTGCTGGTGATCCTGGCCAGCCTGCTGGTAGTGATGATCGACAGCA TCGACGAGATCCACCAGGACTACGGCGACCTGCTGGCCTACATCGAATGGGGCTTCACCGGCATCTTCCTGGTGGAATACCTGCTGCGCCTGTACTGCTC GCCCAAGCCGCTGCGCTATGCCTTCAGCTTCTACGGCCTGGTCGACCTGCTGGCGATCCTCCCCGGCTTCCTCGCCCTGCTCTACCCCGACGCCCAGTAC CTGCTGATCGTCCGGGTGATACGCATGCTGCGGATCTTCCGCGTGCTCAAGCTGCGCCAGTACCTGAGCCAGGCCAATTTCCTGCTCACCGCCCTGCGCG
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| Amino Acid Sequence |
>transporter
MPLQSLLNASRILLRGISQVFLQGDPRLGLACLLAIAVGAPPLLAGALLGGALGPLLARLLHCADSDIEAGLYGYNAVLIGMLLAFRFAWSPGLVSLVAL GCLASVALQRLFLHGLRRRRWLPPYTLGFVLNGWWLVPLGAWLGLAPATHGGCFSCAWSGTAELAALAQGIGEIIFLGEPLAGLLVWLGLLLVSRPSAAW ALAGAAASLPLAWLLGYDWASALAGFYGLNAALAGLALALRYRSVWPPLLGMGLAVALQPLFGLLGLPALTAPFILACLLCIGGERLYLRLAGSLGARLG RRRS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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