Pseudomonas aeruginosa LESB58, PALES_43251 (pqsE)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa LESB58 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AGCGCCGGCGAGAGCCTCGACGACGGCCTGCTGGACCTGCGCCTGGGCGCCGACGGCAACTACTTCGACCTGCTGATGACTGCGGCGCCGGGCAGTGCCT CGCCGACCTTCCTCGACGAGAATGTCCTGCGCGAGGGCGGGGGCGAGTTCCTCATGCGCGGCCGGCCGATGTTCGAGCATGCCAGCCAGACCCTGGTACG GATCGCCGGCGAAATGCTCGCGGCCCATGAGCTGACCCTGGACGACATCGACCATGTGATCTGCCATCAACCGAACCTGCGCATCCTCGATGCGGTGCAG GAGCAACTGGGCATTCCCCAGCACAAGTTCGCGGTGACCGTGGATCGTCTGGGCAACATGGCTTCGGCCTCGACCCCGGTCACGCTGGCGATGTTCTGGC CGGACATCCAGCCGGGACAGCGGGTGCTGGTCCTGACCTACGGCTCCGGCGCGACCTGGGGCGCGGCGCTGTACCGCAAACCTGAGGAGGTGAACCGGCC
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| DNA Sequence for Gene |
>PALES_43251
|pqsE
ATGTTGAGGCTTTCGGCTCCCGGTCAACTGGATGATGACCTGTGCCTGTTGGGGGACGTCCAGGTGCCGGTGTTCCTGCTGCGTCTCGGTGAGGCGAGCT GGGCGCTGGTTGAAGGAGGGATCAGCCGGGATGCCGAATTGGTTTGGGCGGACCTGTGCCGCTGGGTCGCCGACCCGTCCCAGGTGCACTACTGGCTGAT CACCCACAAGCACTACGACCACTGCGGCCTGCTGCCCTACCTGTGTCCGCGGCTGCCGAACGTACAGGTCCTGGCGTCCGAGCGGACCTGCCAGGCCTGG AAGTCGGAAAGCGCGGTGCGGGTGGTCGAGCGCTTGAACCGGCAACTGTTGCGTGCGGAGCAGCGGTTGCCCGAGGCCTGTGCCTGGGACGCTCTGCCGG TTCGCGCGGTGGCCGACGGCGAGTGGCTGGAGCTGGGACCGCGGCATCGCCTGCAGGTCATAGAGGCCCACGGCCACAGCGACGATCACGTGGTTTTCTA CGACGTGCGACGCCGCCGCCTGTTCTGCGGCGATGCCCTGGGCGAGTTCGACGAGGCAGAGGGGGTGTGGCGGCCGCTGGTGTTCGACGACATGGAGGCT TACCTGGAGTCCCTGGAACGTCTGCAGCGTCTGCCGACCCTGCTGCAACTGATCCCGGGACACGGCGGCCTGCTGCGGGGGCGGCTGGCCGCGGATGGGG CCGAGTCGGCCTATACCGAGTGTCTGCGCCTGTGCCGGCGGTTGCTCTGGCGCCAGTCCATGGGCGAATCCCTCGACGAACTGAGCGAGGAGCTGCACCG CGCCTGGGGTGGGCAGAGCGTCGACTTCCTGCCCGGCGAACTGCACCTGGGGAGCATGCGCCGGATGCTGGAGATTCTCTCCCGCCAGGCGCTGCCTCTG GACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GACGGGACATCCATTGCGGCGATCGCCGCCGACGGCAGCGGTCGCAATTGGGGGAAAGGGGGGTTATCGATGATGAACATGCCGTTGCGCGCTAGCGTCG CGCAGGCCAGTCGCCCATGGGCGCGAGGAGGTGGCTCGTGAGCGGGGTTGGCTATCGACTGGAAGAAAGTCTGGAGTACCGCACGCTGGTGCCGGAGGCG CTGTCGATCTGGCGCATGGCCGGCGCCAACCGGATGCTGTTCGACTGCTTCGACGTGGACAGCAAGGCTGCGCGGCGTAGCGTGGCGATCCTTTCCAGCT GCCTGCGCATCGAGTGCTGGGGGCGCGATGTGGTGCTGCGGGCGTTGAACTCCAACGGACGCGCCTTGCTGGCGCCGTTGAGCGAGGCCTGTCCGGCCCA GGTCACCTGCTTGCGTGACGGCGACACCCTGCACTGGCGCTTCCCCCAGGAAGAGTCGCATGCGGACGAGTGGCGACGCCTGCATGGCCTGTCCAGCCTG
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| Amino Acid Sequence |
>Quinolone signal response protein
MLRLSAPGQLDDDLCLLGDVQVPVFLLRLGEASWALVEGGISRDAELVWADLCRWVADPSQVHYWLITHKHYDHCGLLPYLCPRLPNVQVLASERTCQAW KSESAVRVVERLNRQLLRAEQRLPEACAWDALPVRAVADGEWLELGPRHRLQVIEAHGHSDDHVVFYDVRRRRLFCGDALGEFDEAEGVWRPLVFDDMEA YLESLERLQRLPTLLQLIPGHGGLLRGRLAADGAESAYTECLRLCRRLLWRQSMGESLDELSEELHRAWGGQSVDFLPGELHLGSMRRMLEILSRQALPL D
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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