Pseudomonas aeruginosa LESB58, PALES_42561
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa LESB58 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCGTCCTGCTCGACCCCAGAGCGAATCGCCAGGTCGAAGCCCTCGCCAACCAGGTCGCGCAGGCCGTTGTACAGGTCCAGCTCGACGCGCAGCAGCGGAT GGCGTTCCTGGAAGTCCTCCAGCAGTGCATCGAACAGGGTCTCGCCCAGCGAGACCGGGAGGGTCACCCGCACCCGTCCTTCCGCTCGCTCCTGCAAGCG CGCCACCGCCTGCCGCGCGCGCTCGGCCTGCACCAGCAAGGCCTGCGCCTCGGGCAGCAGCGCGGCGCCGGCGGCGGTCAGCGAAAGACGGCGGGTGGTG CGGTGCAAGAGGGTCACGCCGAGCTTCTGCTCGAGGACGCCAATGCGCTTCGACAGTTGGCCCTTGCTGCAACCGAGACGCTCGGCGGCGCGGGTGAAAC TGCCCAGGTCGTGGAGTACGGCGAAGGCGGCGAGATCGTCCAGGTCCTTCACGATTGTTTCCCTATGAAAACGGTAGGTTGTCGATTGACAGGATTATCC
|
|
| DNA Sequence for Gene |
>PALES_42561
ATGGCAAAAGCGACTCTACACTGGAAACCACTCACCTTCACTCAACGAGAGGCCTGTATGAAAATCATCCTGATCGGCGCCAGCGGCACCCTTGGCAAGG GTATCGACAAAGAACTCTGCGAGCGCCACGAGATCATCCGGGTAGGCCACAGCAGCGGCGATTTCCAGGTCGACATCAGCGACTCAGACTCCATTCGCGC CCTGTTAGAGAAAACCGGTCGCTTCGACGCGCTGATCGCCGCGGTCGGCAAGGTGCACTTCGGCGCCCTGGAGGAAATGGGCGAGGCGCAATACCAGCTC GGCCTGCGCGACAAGCTGATGGGCCAGGTCAACCTGGTACTGCTCGGCCGCGAGTACGCCAACGACGGGGGCTCCTTCACCCTCACCAGCGGCGTGCTCG CCGAGCAGCCGATCCGCTTCGGCAGTTCGGCGAGCATGGTCAACTGCGCCGTCGAGGGCTTCGTCCGCGGCGCAGCCCTGGAGTTGCCGCGCGGCCTGCG CATCAACGCCGTCAGCCCGACCGTGGTCAGCGAGGCGCTGCCCGGCTACGCGCCCTACTTCCGTGGCTTCAAGCCGGTTCCGGCGGCGGACGCCGCGCTG GGTTACGCACGCAGCGTGGAAGGCGCGCAGACCGGCCAGGTGTACCGCATCTGGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCGATATTTCTCAGGAGAAGCGGTCGGCGTAGCAGGTCGGCGAACTGCCCGGCTGCTGGCGGTCCAGCTCCTCCTCGAGGAACTCGGCCAGCACCACGGC ATTGTTGTGCTGCTGGTCGTGGGCGCCGTAGAGCAGCGTCAGGGTGCCCTCCCGAGCGCTGTCGAGCAGGCCCCACCAATGTTCCGGGTGCGCCTGCAAC TCGGCGCGGTAGTGTTCGCGGAAGCTGTCGAAGAGTGCCGGATCGTGGCAGAACTGCTTGCGCACCTCGTTGGAGGGCGCCACGTCCTTCAGCCAGTCGT CCATGGCCAGGGCCTCCTTGCGGATGCCGCGCGGCCACAGCCGGTCCACCAGTACGCGCCGGCCATCGGCGGGCGACGCCGGTTCGTATACACGCTTGCA TTGGATCATCGATCGACTCCCTGGTTGCGATGAAGTCCGATCCGGACTTGAGCTAGGCCCGGACGCTCGGTAACGTGGGCGCATTTTCGATGGAGTCTTC
|
|
| Amino Acid Sequence |
>short chain dehydrogenase
MAKATLHWKPLTFTQREACMKIILIGASGTLGKGIDKELCERHEIIRVGHSSGDFQVDISDSDSIRALLEKTGRFDALIAAVGKVHFGALEEMGEAQYQL GLRDKLMGQVNLVLLGREYANDGGSFTLTSGVLAEQPIRFGSSASMVNCAVEGFVRGAALELPRGLRINAVSPTVVSEALPGYAPYFRGFKPVPAADAAL GYARSVEGAQTGQVYRIW
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|