Pseudomonas aeruginosa LESB58, PALES_42401 (flgF)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa LESB58 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GGTGCAGGGCCAGGTGGTGCTGGCCAACTTCGCCAACATCCAGGGCCTGACGCCGATCGGCAAGACCTCCTGGGTGCAGTCCTCGGAGTCCGGCGAGCCG GCGGTCGGCGCGCCGCGCTCGGGCACCCTGGGGGCGTTGCAATCCGGCGCGCTGGAAGCGTCCAACGTGGACATCTCCAACGAACTGGTGAACCTCATCG TCCACCAGCGCAACTACCAGGCCAATGCCAAGACCATCCAGACCGAGGATGCGGTGACCCAGACCATCATCAACCTGCGCTGATGACGGCGTGCCGGTGC CGTCCGGGCACCGGCAAGGCCCTTGCCGCCAGCGGCAACCCATGGCCAGGGGTTGCCCCCGAAGCCTCCGAAAGGAGGCTTTCTGTTTTATAAAATCCTT TTAAATCAATGTATTAATTGTTTTTTCGAATTCTGGCACGGCGCTTGCTGGATAACCTGCAAGAAAGCCCGGCGGATTGTGCCGGTGCCTGGAGGATTCG
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| DNA Sequence for Gene |
>PALES_42401
|flgF
ATGGACAAGATGCTGTACGTCTCCATGAGCGGGGCCAGCCAGAACACCCTGGCGATGCGTGCTCATGCCAACAACCTGGCGAACATCTCGACCAGCGGCT TTCGTCGCGACTTCGAGCAGGCGCGTTCGATGCAGGTGTTCGGCGACAGCTTCCCGGCGCGGGTATTCGCCATGAGCGAGCGGCCCGGTACCGATTTCAG CCATGGCAGCCTCCAGGAAACCGGCAACGAGCTGGACATCGCCATCGACGGCGACGGCTTCGTCGCGGTCCAGGCGCCGGATGGCAGCGAGGCCTACGTG CGTACCGCCGGCATGCATATCGACGCCCTCGGCATGCTGCGCACCGGCGACGGCTTGCCGGTGCTCGGCAACGGTGGGCCGATCGCCGTGCCGCCGGAGG AAAAGGTGGAGATCGGCCAGGACGGCACCATCAGCATCCGCGCCCTTGGCGAGAACCCCAACGTGGTCGCCGTGGTGGACCGGATCAAACTGGTCAACCC GAACCTGAAGCAGATGGAGAAGGGTACCGACGGCCTGCTGCACTACAAGCCGCAGCCGGGCGAGCAGGCGCCGCTGGCCGACGCCAACGTGAAGGTGGTC TCCGGTTTCCTGGAAAGCAGCAACGTGAACGCGGTGGAAGAGATGACCGCGATCCTCTCGCTGTCCCGTCAATTCGAGCTGCACGTGAAGATGATGCGCA CCGCCGAGGACGATTCGGCGGCCATGGCGCGGGTTTTGCAAATCAGCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCACTAGAGCGTGGTGCCATAAAACCGGCACCCGAGGAGCACGACGATGTTATCGGCACTGTGGGTCAGCAAGACCGGTCTGTCCGCCCAGGACATGAAC CTGACCACCATTTCCAACAACCTGGCCAACGTATCCACCACCGGCTTCAAGCGCGACCGCGCGGAGTTCCAGGACCTGCTGTACCAGATCCGGCGCCAGC CGGGCGGCCAGTCGACCCAGGACAGCGAGCTGCCTTCGGGCCTGCAATTGGGTACCGGTGTGCGCGTCGTCGGCACCCAGAAGATCTTCACCCCGGGCAG CCTGCAGACCACCGAGCAGCCGCTGGACATGGCGGTCAACGGGCGCGGCTTCTTCCAGGTCCTGCTGCCGGACGGCACCGTGTCCTACACCCGCGACGGC AGCTTCCACCTGAACTCCGACGGGCAGATCGTCACCTCCAACGGCTTCGCCCTGGAGCCAGCGATCGTGGTGCCCAACGAGACCCAGACCTTCACCGTCG
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| Amino Acid Sequence |
>flagellar basal body rod protein FlgF
MDKMLYVSMSGASQNTLAMRAHANNLANISTSGFRRDFEQARSMQVFGDSFPARVFAMSERPGTDFSHGSLQETGNELDIAIDGDGFVAVQAPDGSEAYV RTAGMHIDALGMLRTGDGLPVLGNGGPIAVPPEEKVEIGQDGTISIRALGENPNVVAVVDRIKLVNPNLKQMEKGTDGLLHYKPQPGEQAPLADANVKVV SGFLESSNVNAVEEMTAILSLSRQFELHVKMMRTAEDDSAAMARVLQIS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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