Pseudomonas aeruginosa LESB58, PALES_42291 (fliC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Sequence Data

Strain Pseudomonas aeruginosa LESB58 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
TGGAGGCGATCCGCGCGCACCTGGCCGATGCAGACGCCAACGCCGCGGCCGGCGCGCAGTTGCGCGAGGCGGTGCGCCGCGACTGGATGCTCGAAGGCGC GCATCTCGAGGCATGGGCGGCAGCCTGGCTGCCGGACTGAATCCGGGGTTTTCTCGAACGAGGCCGGTGGCGCAAGCCATCGGCCTTTTTTCATGCCCGG CGTGCCCTGTTGCACGGGAGGGCTAAAGAAAATCGCCGGGGGGTCGATGCAATGGGTGTCGGAACTTCCACCCTCTGCCGGACCAACCGGGGGCGGTTTA GGACCGATATTGGCGAGTCCTCTTCGAAGCATGTAACCCACTGAAGAGGAAGAGAAAAAGAAAATGTTGATTTTTTCTCTAAAGCTCCGCCGGGAAACGC CGATAAACACCATGAACGCGAATTCTTGGGGCACCTGAGCAAGCAGGCCGAGAGATCGCAAGCTCAGGTAACCGAAATAGGTCCTTTGGAGGAAATCACC
DNA Sequence for Gene
>PALES_42291 |fliC
ATGGCCCTTACAGTCAACACGAACATTGCTTCCCTGAACACTCAGCGCAACCTGAATGCTTCTTCCAACGACCTCAACACCTCGTTGCAGCGTCTGACCA CCGGCTACCGCATCAACAGTGCCAAGGACGATGCTGCCGGCCTGCAGATCTCCAACCGCCTGTCCAACCAGATCAGCGGTCTGAACGTTGCCACCCGCAA CGCCAACGACGGCATCTCCCTGGCGCAGACCGCTGAAGGTGCCCTGCAGCAGTCCACCAATATCCTGCAGCGTATCCGCGACCTGGCCCTGCAATCCGCC AACGGCTCCAACAGCGACGCCGACCGTGCCGCCCTGCAGAAAGAAGTCGCTGCGCAACAGGCCGAACTGACCCGTATCTCCGATACCACCACCTTCGGTG GCCGCAAGCTGCTCGACGGCTCCTTCGGCACCACCAGCTTCCAGGTCGGTTCCAACGCCTACGAGACCATTGACATCAGCCTGCAGAATGCCTCTGCCAG CGCCATCGGTTCTTACCAGGTCGGCAGCAACGGCGCGGGTACCGTCGCCAGCGTAGCGGGCACCGCGACCGCTTCGGGCATCGCCTCGGGCACCGTCAAC CTGGTCGGTGGCGGTCAGGTGAAGAACATCGCCATCGCCGCCGGCGATAGCGCCAAGGCCATCGCCGAGAAGATGGACGGTGCGATCCCGAACCTGTCGG CTCGTGCCCGTACCGTGTTCACCGCTGATGTCAGCGGCGTGACCGGTGGTTCGCTGAACTTCGACGTAACCGTTGGCAGCAACACCGTGAGCCTGGCAGG CGTGACCTCCACTCAGGATCTGGCCGACCAACTGAACTCCAACTCGTCGAAGCTGGGCATCACTGCCAGCATCAACGACAAGGGTGTACTGACCATCACC TCCGCTACCGGCGAGAACGTCAAGTTCGGTGCGCAGACCGGTACCGCTACTGCCGGTCAGGTCGCAGTGAAGGTCCAGGGTTCCGACGGCAAGTTCGAAG CGGCCGCCAAGAACGTGGTAGCTGCCGGTACTGCCGCTACCACCACCATCGTGACCGGCTACGTGCAACTGAACTCGCCGACCGCCTACTCGGTCAGCGG TACCGGCACCCAGGCTTCGCAGGTCTTCGGCAACGCCAGCGCCGCGCAGAAGAGCAGCGTTGCCAGCGTCGACATCTCCACTGCCGACGGCGCCCAGAAC GCCATCGCGGTAGTCGATAACGCCCTGGCTGCGATCGACGCCCAGCGTGCTGACCTCGGTGCTGTTCAGAACCGCTTCAAGAACACTATCGACAACCTGA CCAACATCTCGGAAAACGCTACCAACGCTCGTAGCCGCATCAAGGACACCGACTTCGCTGCCGAAACCGCGGCGCTGTCGAAGAACCAGGTGCTGCAACA GGCCGGTACCGCGATCCTGGCCCAGGCCAACCAGCTGCCGCAGGCGGTCCTGAGCCTGCTGCGCTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCCGGGAACGGTCACTCACGCGGTACTGGGAGGAAGGGGTGACCCTTCCTCCCTTTTCCCTTTGCGAGGCATGAGAAATGGACGTCGGAAATATCACTT CCCTTTCTACGTTCAAGACCGGCAGGGCCCCGGAGGCCAGCGGCGATATCTTTGCGCCGCGCAGCGCAGCGGATGGCAGCGGCAAACCGTTGCCGGAAGT GACGGCTTCCCGGGAGGCCAGCGAATCTCGCGATGACCTGGGGCTCGCCGTCAGCGACATCCAGTCTTTCGTGCAGAGCGTCAAGCGCAACTTGAACTTC AGCATCGACGATTCCTCTGGCCAGGTCGTGGTCAAGGTGATCGACGGTGACTCGGGCGAAGTCGTGCGGCAAATCCCTTCCGAAGAAGTACTAAAACTTG CCGCCCGGCTCGACGACGTACGCAGTGTCCTGTTCGAAACCCGCGCCTGACGCGCGGGTTGAACGACTTGGCATGGTGCTTGCCCTATCGAAGGGATAGG
Amino Acid Sequence
>flagellin type B
MALTVNTNIASLNTQRNLNASSNDLNTSLQRLTTGYRINSAKDDAAGLQISNRLSNQISGLNVATRNANDGISLAQTAEGALQQSTNILQRIRDLALQSA NGSNSDADRAALQKEVAAQQAELTRISDTTTFGGRKLLDGSFGTTSFQVGSNAYETIDISLQNASASAIGSYQVGSNGAGTVASVAGTATASGIASGTVN LVGGGQVKNIAIAAGDSAKAIAEKMDGAIPNLSARARTVFTADVSGVTGGSLNFDVTVGSNTVSLAGVTSTQDLADQLNSNSSKLGITASINDKGVLTIT SATGENVKFGAQTGTATAGQVAVKVQGSDGKFEAAAKNVVAAGTAATTTIVTGYVQLNSPTAYSVSGTGTQASQVFGNASAAQKSSVASVDISTADGAQN AIAVVDNALAAIDAQRADLGAVQNRFKNTIDNLTNISENATNARSRIKDTDFAAETAALSKNQVLQQAGTAILAQANQLPQAVLSLLR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site