Pseudomonas aeruginosa LESB58, PALES_41661 (nrdB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005506 iron ion binding
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA1155
 ECO:0000249
sequence similarity evidence used in automatic assertion		 16829681
Biological Process GO:0009263 deoxyribonucleotide biosynthetic process
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA1155
 ECO:0000249
sequence similarity evidence used in automatic assertion		 16829681
Cellular Component GO:0005971 ribonucleoside-diphosphate reductase complex
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA1155
 ECO:0000249
sequence similarity evidence used in automatic assertion		 16829681
Biological Process GO:0009263 deoxyribonucleotide biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000355
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016491 oxidoreductase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.10.620.20
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Nucleotide biosynthesis and metabolism Other LESB58 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Purine metabolism ECO:0000037
not_recorded
PseudoCAP Pyrimidine metabolism ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PIRSF PIRSF000355 NrdB IPR000358 Ribonucleotide reductase small subunit family 64 415 0.0
MobiDBLite mobidb-lite consensus disorder prediction - - 28 51 -
CDD cd01049 RNRR2 IPR033909 Ribonucleotide reductase small subunit 95 391 8.53956E-114
FunFam G3DSA:1.10.620.20:FF:000003 Ribonucleoside-diphosphate reductase subunit beta - - 68 396 0.0
MobiDBLite mobidb-lite consensus disorder prediction - - 1 51 -
SUPERFAMILY SSF47240 Ferritin-like IPR009078 Ferritin-like superfamily 56 388 5.73E-98
Pfam PF00268 Ribonucleotide reductase, small chain IPR000358 Ribonucleotide reductase small subunit family 95 382 1.8E-87
MobiDBLite mobidb-lite consensus disorder prediction - - 1 15 -
Gene3D G3DSA:1.10.620.20 Ribonucleotide Reductase, subunit A IPR012348 Ribonucleotide reductase-like 68 396 6.3E-98
PANTHER PTHR23409 RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN IPR000358 Ribonucleotide reductase small subunit family 92 410 1.1E-68

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.