Pseudomonas aeruginosa LESB58, PALES_40661 (aprD)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa LESB58 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GGCACCCTGGAGCTGGGTAGCTACAACGAGGTCAAGCTGCTGAGCTGGAACGAGGTGACCCTCAAGGACCTGCCCATCGTCGGCGGCATCCTCGGCTACG TGCCGGTGGTCAAGGACATCGGTGTCTCGCTGCCGACGCTGGACCTGCACTTCGACAGCAAGCTGTATGCGCAAACGATTGCCGGTGTCGATGTCGCCGG GGTCGGGCCGAAGGGCCAGATCGAGCTGGTGCATGACCTCGACAATGACCTGTCGATCGTCGCCGGTATCGCCGGGGATACCGCGCACAGCGCCCTGGAC GGTGCCGGCAAGGTGCTCGCGGCGCTGCTCGGCCACGGCGGCGAAGCGGCGCCGCCGACAATCCAGCTGATCGGCGCCGACCCGGCGCCGGAGCATCAGG CCCTGGCCGCCTGACGGCGAGGGAACGCCCGGCACAGGGAGGTGCCATCCGGGCTCATTCGGGATTCCAGCGGCAGTCGTGGCAGAAGTGAGCGCGCTCG
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| DNA Sequence for Gene |
>PALES_40661
|aprD
ATGGCAAGGCTCGGTTCCAGCGTTACCAACGAAATCAAACAGGCCCTGGCGGCCAGCCGCGGCGCATTGCGCAGCGTGGCGGCGTTCTCCGGGGTGATCA ACCTGCTGATGCTGGTGCCCTCGCTGTACATGCTGCAGGTGTACGACCGCGTGCTGTCCTCGGCCAACGAAGTCACCCTGTTGATGCTGACCCTGATGGC GCTTGGCGTGTTCGTCTTCATGGGCGCGCTGGAGGCGCTGCGCAGCTTCGTCCTGGTGCGGGTCAGCGAACGCTTCGACGGCCAGTTGCACGGGCGGATC TACGCCGCCGCCTTCGAACGCAACCTGCGCGCCGGCGGCCAGGAGGCCAGCCAGGCGCTGCACGACCTGACCACCCTGCGCCAGTTCATCACCGGCCAGG CGCTGTTCGCCTTCTTCGACGCACCCTGGTTCCCGGTCTACCTGCTGGTGATCTTCCTCTTCGACCCCTGGCTCGGCCTGCTCTCGCTGGTCGGCGCGCT GGCCCTGATGGCCCTCGCCTGGTTCAACGAACGCGCCACCCGTGCGCCGCTGGCCAAGGCCGGCGAGTTGTCGATCAAGTCCGGCCAACTGGCCAGCAAC AACCTGCGCAACGCCGAGGTGATCGAGGCGATGGGCATGCTCGGCAGCATGCGCGGGCGCTGGGAACGGCTGCACCAGGCGTTCCTCGACCAGCAGAGCC TGGCCAGCGAGCGCGCGGCGCGGATCAACGCGCTGAGCAAATACCTGCGCATCGCCCTGCAATCCCTGGTGCTCGGCCTCGGCGCCTGGCTGGCGGTGGA GGGACGCATCACCCCGGGGATGATGATCGCCGGCTCGATCCTGATGGGCCGTGCGCTGGGGCCTATCGACCAACTGATCGGCGTGTGGAAGCAGTGGGGC GCGGCGCGCGATGCCTATCGCCGGCTGAGCGGCCTGCTCGACGAATTCCCCGCCCGCGAGCGGCGCATGGAATTGCCCGAGCCGCGTGGCCACCTGCTGC TGGAATCGCTGGACGCGGCGCCGCCCGGCAGCGAGGCGCGCACCCTGCGTGGCCTGACCCTGGCGATCCCGGCCGGCTCGGTGGTCGGCGTGATCGGTCC GTCCGGCTCCGGCAAGTCGAGCCTGGCGCGGGTAGTGCTGGGCATCTGGCCGACCCTGCACGGCAGCGTGCGCCTGGACGGCGCCGAGATCCGCCAGTAC GAGCGCGAGACCCTCGGCCCGCGCATCGGCTACCTGCCGCAGGACATCGAACTGTTCGCCGGCACGGTGGCGGAAAACATCGCCCGCTTCGGCGAGGTGC AGGCCGACAAGGTGGTGGAGGCGGCGCGCCTGGCCGGGGTCCACGAACTGGTCCTGCGCCTGCCGCAGGGCTACGACACCGTGCTCGGCGTCGGCGGCGC CGGGCTTTCCGGCGGCCAGCGCCAGCGCATCGCCCTGGCCCGGGCGCTGTACGGCGCGCCGACCCTGGTGGTGCTCGACGAACCCAACTCGAACCTCGAC GACAGCGGCGAGCAGGCGCTGCTGGCGGCGATCCAGGCGCTCAAGGCGCGTAGCTGCACGGTGCTGCTGATCACCCACCGGGCCGGCGTGCTGGGTTGCG CCGACCGCCTGCTGGCGCTGAACGCCGGCCAGTTGCACCTGTACGGCGAGCGCGACCAGGTGCTCGCCGCCTTGAACAACCAGCGCGCCGCGTCGGCGTC GCAGCAGCGCGCGGACTACCGGGTGGCCGGCTACGGCGCGCCGCAGGTGGTGGCCGCGCCGCGCCAGGGAGGTGTGGAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCGCACGGTGAAACGCGACGAGAACGCCTATGCGCGACTGGGCTGGCTGCTGGTCCTGTTCGGCTTCGGCGGCGCGCTGCTCTGGGCCGCCTTCGCGCC GCTCGACCAGGGCGTGGCGGTGCCGGCCACGGTGATCATCTCCGGCCAGCGCAAGTCGGTGCAGCATCCGCTGGGCGGGGTGGTCAAGCACATCCTGGTG CGCGACGGCCAGCATGTGGAGGCGGGCGAGCCGCTGATCCGCATGGAACCGACCCAGGCCCGGGCCAACGTCGATTCGCTGCTCAACCGGTACGCCAACG CGCGGCTCAACCAGGCGCGCCTGCAGGCCGAATACGACGGCCGGCGGACCCTGGAGATGCCCGCGGGGCTGGCCGAGCAGGCCCCGCTGCCGACCCTCGG CGAGCGCCTGGAGTTGCAGCGGCAGTTGCTGCACAGCCGCCAGACCGCGCTGGCCAACGAACTCTCCGCATTGCGGGCGAACATCGAGGGGCTGCGCGCC
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| Amino Acid Sequence |
>alkaline protease secretion protein AprD
MARLGSSVTNEIKQALAASRGALRSVAAFSGVINLLMLVPSLYMLQVYDRVLSSANEVTLLMLTLMALGVFVFMGALEALRSFVLVRVSERFDGQLHGRI YAAAFERNLRAGGQEASQALHDLTTLRQFITGQALFAFFDAPWFPVYLLVIFLFDPWLGLLSLVGALALMALAWFNERATRAPLAKAGELSIKSGQLASN NLRNAEVIEAMGMLGSMRGRWERLHQAFLDQQSLASERAARINALSKYLRIALQSLVLGLGAWLAVEGRITPGMMIAGSILMGRALGPIDQLIGVWKQWG AARDAYRRLSGLLDEFPARERRMELPEPRGHLLLESLDAAPPGSEARTLRGLTLAIPAGSVVGVIGPSGSGKSSLARVVLGIWPTLHGSVRLDGAEIRQY ERETLGPRIGYLPQDIELFAGTVAENIARFGEVQADKVVEAARLAGVHELVLRLPQGYDTVLGVGGAGLSGGQRQRIALARALYGAPTLVVLDEPNSNLD DSGEQALLAAIQALKARSCTVLLITHRAGVLGCADRLLALNAGQLHLYGERDQVLAALNNQRAASASQQRADYRVAGYGAPQVVAAPRQGGVE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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