Pseudomonas aeruginosa LESB58, PALES_39261
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa LESB58 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CTTCCTCTCGGTGTTCAACGCCATCGTCGCCATCGTCATCCAGAGCGCCCGGGTGATCTTCAGCAGCGGTCGCGACGCGCTCTGGATGCCAGCGTTGAAC CGTGCCTTCACCCGTATCCATCCGCGCTGGGAATCGCCCTGGCTGGCCACGCTGTTCCTCGCCATTCCCTCGGCGGCGCTGAGCTTCAGCTCCAACCTGG CCGAACTGACCTCGTTCACCGTGTTGCTGATCGTCATGGTCTACCTGATCGTCGCCCTCTGCGCGCTGTTCAGCCGGGTGCTGCGGCGCGACCGCGAGCA TCCCTACCGGATGCCGCTGTGGCCGCTGCCGGCGCTGCTGGCGGTGAGCGGCGCGGGATACCTGCTGCTCAACCTGTTCCTGGCGGCCTCGGCCAGGGAC GTGATGATCATTGTCGGACTGCTGGCGGTGTCGGTGATTCTCTACTGCACCTACGGCAAGCTCAGTCCGGCGTTCCAGAAGCTTTGAAACAGGAGTCCGC
|
|
| DNA Sequence for Gene |
>PALES_39261
ATGCGCGCTCGACAACTTGGCATCACCCTCGGCCTGGGCACTCCCGGCCCGTTCAACGCGATCACCGACGTTCCCGGCGTGCGCGTCGGCCACAGCACCC TGAACCAGCGGATCGACGGCAGGCAGGTTCGCACCGGCGTCACCCTGGTCCAGCCGCGCGCCGGTGCGGCGCGCCTGCAACCCTGCTTCGCCGGCTGCCA TGTGCTCAACGGCAACGGCGACGCCACGGGCCTGGAGTGGATCCGCGAAGCCGGCCTGCTGACCACCCCGATCGCCATCACCAATACCCACAGCGTCGGC GCGGTGCGCGACGCGCTGATCGCCGAGGAGCGCGCCGAACTCGGCGACAGCGGGCTGTACTGGTGCATGCCGGTGGTGATGGAGACCTTCGACGGCCTGC TCAACGATATCTGGGGCCAGCACGTCGGCGCCCGCCAGGTCGGCGAGGCGCTGGCCTGCGCCGAGTCCGGACCGGTCCGCGAAGGTTCGGTGGGCGGCGG TACCGGGATGATCTGCCACGAGTTCAAGGGTGGCATCGGTAGCGCATCGCGGCGGCTTCCGGCGGAGCAGGGCGGCTGGACGGTGGGCGCGCTGGTCCAG GCCAACCACGGCCAGCGCCGCGAGCTGCGGGTCGACGGCTATCCTGTCGGCCGCCGGTTGGGCGACATCCCCTCGCCGTTCAGCGAGGAAGGCACCCCGG GTATGGGCTCCATCGTGGTGATCCTGGCCACCGATGCGCCGCTGTTGCCGCACCAGTGCCAGCGCCTGGCGCAGCGCGCCTCGATCGGCGTCGCGCGCAC CGGCGGCGGTACCGAGGACTCCAGCGGCGACGTGTTCCTCGCTTTCGCCACCGGCAACCAGGACCTGCCGCCAGCCGACTATGCGCGCAAGGACCTGCCG CAGAGCACGCCGCTGCGGATGCTCAACAACGACCACATCTCGCCGTTGTTCGCCGCGGCGGCGGAGGCGGTGGAAGAAGCCATCGTCAACGTGCTGCTGG CCGGCGAGGACATGCGCACCGAGGACGGCCGGCTGGTGCCCGCGCTGAAGGGGGAGAGGCTCCTGGCGGCGCTGCGCGAGACCGGCTGGCCGGGACGCTG A
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
AAGCGGCTCAGCGCCAGCCGCGGGTGCGCGCCACCGCTTCGCTGAAACGCACCTGCCAGCGCCGGGCGGTGCCGGCGTCGACCCGCGGCTGGAACTCCGT GCGGGTGTTGCGCGGCTCCGCCAGCTCGTAGCCGAGGCCACGCGCGGCAAGGGCGGCGCAACCGAAGGCGGTGAGTTCGTCGAAGCGCTGGGTGACGATG CGCCGTTGCAGGCTGTCGGAGAGGAACTGGGCGAAGTAGGGGCTGCGCGCCAGGCCGCCGTCGATGGACAGGCGGTCGGTGACCTTCAGGTAGCCGTCCA TCGCCTGGATCACCTCGGCGCTGCGTAGCACCACGCCTTCGAGCAGGGCCTGGCAGAGGTCCTCGCGGCGGGTGCCGGCGTCCATTCCCAGCCACATCGC GCCGGCGCTGCGGTCCCAGTGCGGGCATGCGAGTCCCGACAGGGCCGGGACGAAGGCCAGGCCGCGCTCGATGGCCGGCGGCCGGTCGAAGCCGGCCAGT
|
|
| Amino Acid Sequence |
>putative D-aminopeptidase
MRARQLGITLGLGTPGPFNAITDVPGVRVGHSTLNQRIDGRQVRTGVTLVQPRAGAARLQPCFAGCHVLNGNGDATGLEWIREAGLLTTPIAITNTHSVG AVRDALIAEERAELGDSGLYWCMPVVMETFDGLLNDIWGQHVGARQVGEALACAESGPVREGSVGGGTGMICHEFKGGIGSASRRLPAEQGGWTVGALVQ ANHGQRRELRVDGYPVGRRLGDIPSPFSEEGTPGMGSIVVILATDAPLLPHQCQRLAQRASIGVARTGGGTEDSSGDVFLAFATGNQDLPPADYARKDLP QSTPLRMLNNDHISPLFAAAAEAVEEAIVNVLLAGEDMRTEDGRLVPALKGERLLAALRETGWPGR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|