Pseudomonas aeruginosa LESB58, PALES_36811
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Cellular Component | GO:0016020 | membrane |
Inferred from Sequence Model
Term mapped from: InterPro:SM00283
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0007165 | signal transduction |
Inferred from Sequence Model
Term mapped from: InterPro:SM00283
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| PseudoCAP | Chemotactic transducer (MCP) |
ECO:0000037
not_recorded |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SMART | SM01358 | HBM_sequencesselection_2 | IPR032255 | Helical bimodular sensor domain | 37 | 301 | 2.7E-38 |
| Pfam | PF00015 | Methyl-accepting chemotaxis protein (MCP) signalling domain | IPR004089 | Methyl-accepting chemotaxis protein (MCP) signalling domain | 436 | 618 | 7.9E-45 |
| Coils | Coil | Coil | - | - | 580 | 607 | - |
| Coils | Coil | Coil | - | - | 191 | 211 | - |
| SMART | SM00304 | HAMP_11 | IPR003660 | HAMP domain | 376 | 428 | 22.0 |
| Gene3D | G3DSA:1.20.1440.210 | - | - | - | 27 | 126 | 3.1E-5 |
| SMART | SM00283 | MA_2 | IPR004089 | Methyl-accepting chemotaxis protein (MCP) signalling domain | 390 | 651 | 2.3E-84 |
| SMART | SM00304 | HAMP_11 | IPR003660 | HAMP domain | 323 | 375 | 1.4E-12 |
| Pfam | PF00672 | HAMP domain | IPR003660 | HAMP domain | 322 | 371 | 3.5E-12 |
| SUPERFAMILY | SSF58104 | Methyl-accepting chemotaxis protein (MCP) signaling domain | - | - | 343 | 652 | 5.23E-79 |
| Gene3D | G3DSA:1.10.287.950 | - | - | - | 323 | 652 | 1.9E-80 |
| CDD | cd06225 | HAMP | - | - | 326 | 370 | 2.33365E-10 |
| FunFam | G3DSA:1.10.287.950:FF:000001 | Methyl-accepting chemotaxis sensory transducer | - | - | 323 | 652 | 3.0E-102 |
| Coils | Coil | Coil | - | - | 458 | 478 | - |
| PANTHER | PTHR32089 | METHYL-ACCEPTING CHEMOTAXIS PROTEIN MCPB | - | - | 24 | 651 | 3.0E-114 |
| CDD | cd11386 | MCP_signal | - | - | 417 | 616 | 1.38734E-47 |
| Coils | Coil | Coil | - | - | 79 | 99 | - |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.