Pseudomonas aeruginosa LESB58, PALES_36691
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0033103 | protein secretion by the type VI secretion system |
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA1658
|
ECO:0000249 sequence similarity evidence used in automatic assertion |
18524912 |
Functional Classifications Manually Assigned by PseudoCAP
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PANTHER | PTHR35565 | CYTOPLASMIC PROTEIN-RELATED | IPR010269 | Type VI secretion system TssC-like | 3 | 491 | 0.0 |
| Pfam | PF05943 | EvpB/VC_A0108, tail sheath N-terminal domain | IPR044031 | TssC1, N-terminal | 65 | 364 | 1.7E-130 |
| Pfam | PF18945 | EvpB/VC_A0108, tail sheath gpW/gp25-like domain | IPR044032 | TssC1, C-terminal | 378 | 488 | 2.5E-44 |
| NCBIfam | TIGR03355 | JCVI: type VI secretion system contractile sheath large subunit | IPR010269 | Type VI secretion system TssC-like | 17 | 489 | 0.0 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.