Pseudomonas aeruginosa LESB58, PALES_36591

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0033103 protein secretion by the type VI secretion system
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA1668
 ECO:0000249
sequence similarity evidence used in automatic assertion		 18524912

Functional Classifications Manually Assigned by PseudoCAP

Protein secretion/export apparatus Other LESB58 genes in this class
Membrane proteins Other LESB58 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR03349 JCVI: DotU/TssL family secretion system protein IPR017732 Type IV / VI secretion system, DotU 61 270 2.1E-72
MobiDBLite mobidb-lite consensus disorder prediction - - 1 16 -
MobiDBLite mobidb-lite consensus disorder prediction - - 1 30 -
Gene3D G3DSA:1.25.40.590 Type IV / VI secretion system, DotU IPR038522 Type IV / VI secretion system, DotU superfamily 59 217 8.9E-46
Pfam PF09850 Type VI secretion system protein DotU IPR017732 Type IV / VI secretion system, DotU 62 264 2.7E-66
PANTHER PTHR38033 MEMBRANE PROTEIN-RELATED - - 22 280 3.5E-94
NCBIfam NF038228 NCBIFAM: type IVB secretion system protein IcmH/DotU - - 58 275 4.2E-53

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.