Pseudomonas aeruginosa Pae_CF67.10q, ACO71_RS07605
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain Pae_CF67.10q CF67.10q_contig_7, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAACCCGCGCGAACTGCTGGCGCGGATCAAGGCCGTGCTGCGCCGCCAGGCGCCGCTGGTGCCCGGCGCGCCTGCCGGTGCCGACGAGGTGGTGACCTTC GGCGACTACCAGCTGTTCCTCGCCACCCGCGAACTGAAGAAGGGCGACGAGGTACACATGCTGACCACCGGCGAGTTCGCCGTGCTCAAGGCCCTGGTGC AGCACGCCCGCGAACCGCTGACCCGGGACAAGCTGATGAACCTCGCCCGTGGCCGCGAGTGGGATGCCCTGGAGCGTTCCATCGACGTGCAGATCTCGCG CCTGCGCCGGCTGATCGAGCCGGATCCGTCCAAGCCGCGCTATATCCAGACGGTCTGGGGCGTCGGCTACGTGTTCGTGCCGGACGGCAACGCGCGCAAG GCCTGAGTCTCCGCGCGGCCGGTGCAGCGATGCACCGGCCGCGTCGTCTTACCCGCAACAGGCGTCGGCCCCGTCCGCCGGCGCGCAACCGGTCCGATCG
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| DNA Sequence for Gene |
>ACO71_RS07605
ATGAAAACGCCGCTCTGGTTCCCGCAAAGCTTCTTCGCCCGCACCCTCTGGCTGGTGCTGATCGTCGTGCTGTTCTCCAAGGCGCTGACCCTGGTCTACC TGCTGATGAACGAGGACGTGATCGTCGACCGCCAGTACAGCCACGGCGCGGCGCTGACCATCCGCGCGTTCTGGGCTGCCGACGAGGAGTCGCGCGCGGC CATCGCCAAGGCTTCCGGCCTGCGCTGGGTGCCGAGCAGCGCCGACCAGCCCGGCGAGCAGCACTGGCCGTACACGGAAATCTTCCAGCGGCAGATGCAG ATGGAGCTGGGGCCGGACACCGAGACCCGCCTGCGTATCCACCAGCCGTCGCAGCTCTGGGTGCGCGCACCGAGCCTCGGCGAAGGCTGGCTGGCGGTGC CGCTGTATCCGCATCCCTTGCGTGGCCAACGGATCTGGAGCGTGCTCGGCTGGTTCCTCGGCATCGGCCTGCTCTCCACCGCCGCCGCCTGGATCTTCGT CCGCCAGCTCAGCCAGCCGCTCAAGCGCCTGGTGGTCGCCGCCCGCCAGTTCGGCCAGGGGCGCAGCGTGCGCCTGCCGCTGGGACCGGAGACGCCGAGT GAAATGGCCGAGGTGTATCGCGCCTTCAACCAGATGGCCGAGGATATCGAGCAGGGCGGGCGCGAACGCGAATTGATGTTGGCCGGTGTCTCCCACGACC TGCGCACCCCGCTGACGCGCCTGCGCCTGTCGCTGGAGTTGCTGCCGGAGAGCGAACGGGAGATGGTCGAGGACATGATCCGCGACATCGAGGACATGGA CGCGATCCTCGACCAGTTCCTCGCTTTCATCCGCGACGGCCGCGACGAGCCGGTGGAGGAGGGCGACCTGACCGACCTGGTGCGCGAGGTCGTGGCGCCG TTCAACCAGACTCGCGAGCAGGTGCGCATGGCCTTGCAACCGGTACCGGCGATGCCGTTGCGGCGTGTGTCGATGAAGCGTCTGCTGGGCAACCTGATCG ACAATGCCCTGAACCACGGCGGCGGTTCGGTGGAGGTGGCCAGCTACGTGGCCGGCGAAAGCGCGGCGCCCTACGTGGTGCTGAGCGTGCTCGATCGCGG CCAGGGCATCGATCCCGCGGAAGTGGACAGCATCTTCAATCCCTTCATCCGTGGCGACAAGGCGCGTGGCGGCAAGGGCACCGGCCTCGGCCTGGCGATC GTCAAGCGCATCGCCGCCCAGCACGGCGGCAGCGTCGAACTGCGCAACCGCGATGGCGGCGGCCTGGAAGCGCGGGTCTGCCTGCCGCTGGGGTTGCTGC TGCCGCGCGGCGCGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TACCCGACGGGTTTGTGCCGTTCCAGCGGCACTTCCCGCCCCCTCTCGCGCTTACGGAGAAGGGCGCGCCCCGTCCCTACCAGCGCAACCGGTTTCCCTC GAGCACCGCGGTCTTCCCGTAAGGCCAGGCTCGGTTCTGCGCACCATGCCCGCTGGGCAGGTGGTGGTAGAGCGGCACCTCGATGGCGGCGGCGTATTCG CCGAAGATCCGCTCCAGGCTGTGGGCGACTTCCTTGCGCGGGCAATCGGTGAACGAGCCCAGGCAGATCGCGCCGAGCTGGCGCGCGTCGATGCTTTCGA GCAATTGCCAGAGGCTGCGCTCCAGGCGGTAGTAGGGTTCGCCGACGTCCTCCAGGACCAGGATCGACCCCGCCGGGGCGTGCAGGCCGCCGAGTGTGCC GGCCATGCAGGCCAGGGCGGTGAGGTTGCCGCCGATCAGCGCGCCTTCGACGCGTTGCTTGGGTCCGCCGAGGTGCTGCACCGGGAGTTCATGGTCGATT
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| Amino Acid Sequence |
>protein AmgS
MKTPLWFPQSFFARTLWLVLIVVLFSKALTLVYLLMNEDVIVDRQYSHGAALTIRAFWAADEESRAAIAKASGLRWVPSSADQPGEQHWPYTEIFQRQMQ MELGPDTETRLRIHQPSQLWVRAPSLGEGWLAVPLYPHPLRGQRIWSVLGWFLGIGLLSTAAAWIFVRQLSQPLKRLVVAARQFGQGRSVRLPLGPETPS EMAEVYRAFNQMAEDIEQGGRERELMLAGVSHDLRTPLTRLRLSLELLPESEREMVEDMIRDIEDMDAILDQFLAFIRDGRDEPVEEGDLTDLVREVVAP FNQTREQVRMALQPVPAMPLRRVSMKRLLGNLIDNALNHGGGSVEVASYVAGESAAPYVVLSVLDRGQGIDPAEVDSIFNPFIRGDKARGGKGTGLGLAI VKRIAAQHGGSVELRNRDGGGLEARVCLPLGLLLPRGAA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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