Pseudomonas aeruginosa Pae_CF67.10q, ACO71_RS05965
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain Pae_CF67.10q CF67.10q_contig_6, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GAGATCGTCGGTGAGGCGCTGGTTCAGGCGCAGCTCTTCGTTGCAATAGAAGCGGCGCTTGTCCAAGCTGGTGAAATCGAGAAAGCCGAAATCCATCGGC TTCTTGATCTTGTAGGCGTAGGGACCGGTCAACAGGACCCAGGAGATGTGCGTCTCGATGACCTCGAAGCGCTCCACCGGGTGGGGGTAGAGGGCCGGGT TCTGCAGGGCGGCGATCAGGGTCTGGCTCACGGGATATCCTTGCCTCTGAAATATGCGAAAACCCGCATTATGGCGGGAAGGGGTGACAGTGCAAACCTC GCTGGCGGATAGCAACCATTTGCCGGATCGCCGGTCGAATGCGCCGCGCTGCCGCCGCGTCTATCCACCGGGGCCGCGCAGACCGTGGATGCCGCCGATG CGGTGTCTGTCCGCTGTGGATAAAGTACGTATAATGCGCCGCCATGACGCGTCCCCGATCCCCCCGTTCCCGTAACAGCAAAGCACGCCCGGCACCCGGC
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| DNA Sequence for Gene |
>ACO71_RS05965
CTGAACAAATGGCTCGGCTGGGCTCTCAAGCTCGGCCTCGTCGGCCTGGTGCTCCTCGCCGGCTTCGCCATCTATCTCGATGCCGTGGTGCAGGAGAAAT TCTCCGGCCGGCGCTGGACCATCCCGGCGAAGGTCTATGCCCGCCCGCTGGAGCTGTTCAACGGCCTGAAGCTGAGCAGGGAAGACTTCCTGCGCGAACT CGACGCCCTCGGCTACCGTCGCGAGCCCAGCGTGAGCGGCCCTGGAACCGTATCGGTGGCGGCCAGCGCGGTCGAACTCAATACCCGTGGCTTCCAGTTC TACGAAGGCGCGGAACCGGCCCAGCGCGTGCGCGTGCGCTTCAACGGCAACTACGTCAGCGGGCTGAGCCAGGCCAACGGCAAGGAACTGGCGGTGGCGC GCCTTGAGCCGCTGCTGATCGGCGGCTTGTATCCGGCGCACCATGAGGATCGCATCCTGGTCAAGCTCGACCAGGTGCCGACCTACCTGATCGACACCCT GGTCGCGGTCGAGGATCGCGACTTCTGGAACCACCATGGTGTGTCGCTGAAATCCGTGGCGCGGGCGGTGTGGGTCAACACCACGGCCGGCCAGTTGCGC CAGGGCGGCAGCACCCTGACCCAGCAGTTGGTGAAGAACTTCTTCCTGAGCAATGAGCGCAGCCTGAGCCGCAAGATCAATGAAGCGATGATGGCGGTGC TGCTGGAACTGCACTACGACAAGCGCGACATCCTCGAGTCCTATCTCAACGAGGTGTTCCTCGGCCAGGATGGGCAACGAGCGATCCATGGCTTCGGCCT GGCCAGCCAGTATTTCTTCAGTCAGCCGTTGGCCGAGCTCAAGCTCGACCAGGTGGCGCTGCTGGTCGGCATGGTCAAGGGGCCGTCCTACTTCAACCCG CGGCGTTACCCGGATCGTGCGCTGGCGCGGCGCAACCTGGTGCTCGACGTGCTCGCCGAGCAGGGCGTGGCGACCCAGCAGGAAGTCGACGCCGCCAAGC TGCGCCCGCTCGGCGTGACCCGGCAGGGCAGCATGGCCGACAGCTCCTATCCGGCCTTCCTCGACCTGGTCAAGCGCCAGTTGCGCCAGGACTACCGCGA CGAGGACCTGACTGAGGAAGGGCTGCGCATCTTCACCAGCTTCGATCCGATCCTGCAGGAGAAGGCCGAGACCTCCGTCAACGAAACGCTCAAGCGTCTC AGTGGGCGCAAGGGGGTCGACCAGGTCGAGGCGGCGATGGTCGTGACCAATCCGGAAACCGGTGAGATCCAGGCCCTGATCGGCAGTCGCGACCCGCGCT TCGCCGGCTTCAACCGGGCCCTGGACGCGGTGCGGCCGATCGGTTCGCTGATCAAGCCGGCGGTCTACCTGACCGCTCTCGAGCGGCCGAGCAAGTACAC CCTGACCACCTGGGTACAGGACGAGCCCTTCGCGGTGAAAGGCCAGGACGGCCAGGTCTGGCGACCGCAGAACTACGACCGGCGCTCGCATGGCACGATC TTCCTGTACCAGGGCCTGGCAAACTCCTACAACCTGTCCACCGCCAAGCTCGGCCTCGACGTCGGTGTGCCCAACGTGCTGCAGACCGTCGCCCGGCTGG GTATCAACCGTGACTGGCCGGCCTATCCTTCGATGCTGCTGGGTGCCGGTTCGCTCAGTCCGATGGAGGTCGCCACCATGTACCAGACCATCGCCAGCGG CGGCTTCAACACGCCGTTGCGGGGGATCCGCAGCGTCCTCACTGCCGACGGCCAGCCGCTCAAGCGCTATCCGTTCCAGGTCGAACAGCGCTTCGACTCG GGCGCTGTCTACCTGGTGCAGAACGCCATGCAACGGGTCATGCGCGAAGGCACCGGGCGTTCGGTGTACAGTCAATTGCCGTCGTCGCTGACCCTCGCCG GCAAGACCGGCACCAGCAACGACTCGCGCGATAGCTGGTTCTCCGGTTTCGGCGGCGACCTTCAGGCTGTGGTCTGGCTCGGTCGCGACGACAACGGCAA GACGCCGCTTACCGGCGCCACCGGTGCCTTGCAGGTGTGGGCCAGCTTCATGCGCAAGGCGCATCCGCAATCGCTGGAAATGCCGATGCCGGAGAACGTG GTGATGGCCTGGGTCGACGCGCAGACCGGGCAGGGCTCGGCGGCGGATTGCCCGAATGCCGTACAGATGCCCTATATTCGTGGCAGCGAGCCCGCCCAGG GCCCAGGCTGTGGGAGCCAGAACCCCGCCGGCGAGGTGATGGACTGGGTACGTGGCTGGCTGAATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCGAGAGGACCTGACGTGAAGAAGATTTTCGTATTCGCCGCGCTTGCCGGCAGTGCCCTGCTCGCGGGCTGTGCCAGCCCGCAGCATGGGGCGATCCCG GTGGTGGATTCCGGTACTCCGGTTTCCAACCAGGAAAGCGGCGGTTTCCGCATCACCCGTACCCAGGTACCGCGTACCCAGCAAGGCGCCGCCACCCAGG GCATTCCCCAGGGCGGCGACTCCGGCGTGGTGGTGATGGTGCCGCAGGGCGCCAATTCCGCACCGATCCAGACTTTCCCGGCGCAGTCCGGCGCCGCGCC GATCAGCAGCGCTCCGCTCGGCACCGGCACCCAGTACCAGGCTCCGCCCAGCAGCGCCTCCACGCCACCGCTGGGCGGCAGCTACAACATGCCGCCCAGC GGCGCCAGTCGTTCCGCGCCCACCGGCATTCCGGCCTCCGGCTCGGCCGGCAGCCTGGCAGCCGACGAGCAGTTGGACGGGCCGGTCCTGGCGATGCTCA
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| Amino Acid Sequence |
>penicillin-binding protein
MNKWLGWALKLGLVGLVLLAGFAIYLDAVVQEKFSGRRWTIPAKVYARPLELFNGLKLSREDFLRELDALGYRREPSVSGPGTVSVAASAVELNTRGFQF YEGAEPAQRVRVRFNGNYVSGLSQANGKELAVARLEPLLIGGLYPAHHEDRILVKLDQVPTYLIDTLVAVEDRDFWNHHGVSLKSVARAVWVNTTAGQLR QGGSTLTQQLVKNFFLSNERSLSRKINEAMMAVLLELHYDKRDILESYLNEVFLGQDGQRAIHGFGLASQYFFSQPLAELKLDQVALLVGMVKGPSYFNP RRYPDRALARRNLVLDVLAEQGVATQQEVDAAKLRPLGVTRQGSMADSSYPAFLDLVKRQLRQDYRDEDLTEEGLRIFTSFDPILQEKAETSVNETLKRL SGRKGVDQVEAAMVVTNPETGEIQALIGSRDPRFAGFNRALDAVRPIGSLIKPAVYLTALERPSKYTLTTWVQDEPFAVKGQDGQVWRPQNYDRRSHGTI FLYQGLANSYNLSTAKLGLDVGVPNVLQTVARLGINRDWPAYPSMLLGAGSLSPMEVATMYQTIASGGFNTPLRGIRSVLTADGQPLKRYPFQVEQRFDS GAVYLVQNAMQRVMREGTGRSVYSQLPSSLTLAGKTGTSNDSRDSWFSGFGGDLQAVVWLGRDDNGKTPLTGATGALQVWASFMRKAHPQSLEMPMPENV VMAWVDAQTGQGSAADCPNAVQMPYIRGSEPAQGPGCGSQNPAGEVMDWVRGWLN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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