Pseudomonas aeruginosa LESB58, PALES_33241

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0042413 carnitine catabolic process
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA1999
 ECO:0000249
sequence similarity evidence used in automatic assertion		 19406895
Molecular Function GO:0008410 CoA-transferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01144
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Carbon compound catabolism Other LESB58 genes in this class
Amino acid biosynthesis and metabolism Other LESB58 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Butanoate metabolism ECO:0000037
not_recorded
PseudoCAP Valine, leucine and isoleucine degradation ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:3.40.1080.10:FF:000005 3-oxoacid CoA-transferase subunit A - - 3 228 0.0
PANTHER PTHR13707 KETOACID-COENZYME A TRANSFERASE IPR004165 Coenzyme A transferase family I 6 231 1.6E-96
Gene3D G3DSA:3.40.1080.10 - - - 3 228 1.8E-98
Pfam PF01144 Coenzyme A transferase IPR004165 Coenzyme A transferase family I 11 218 7.2E-78
NCBIfam TIGR02429 JCVI: 3-oxoacid CoA-transferase subunit A IPR012792 3-oxoacid CoA-transferase, subunit A 4 218 4.1E-76
SMART SM00882 CoA_trans_3 IPR004165 Coenzyme A transferase family I 8 219 3.9E-91
SUPERFAMILY SSF100950 NagB/RpiA/CoA transferase-like IPR037171 NagB/RpiA transferase-like 5 226 1.41E-88

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.