Pseudomonas aeruginosa Pae_CF67.10q, ACO71_RS23105
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain Pae_CF67.10q CF67.10q_contig_27, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCTGCGCGGCCTGGCTTCCGAGGGCGCCGAGCGCCTCGGCCCGCTGGCGCGCTTCGCCGATTACCTCTGGCACCTGGCGCTGCCGGTGGGTTCGCTGGTG GTCGGCGGTTTCGCCAGCCTGACCCTGCTGACCAAGAACAGCTTCCTCGACGAGATATCCAGGCAGTACGTCGCCACCGCTCGCGCCAAAGGGCTCAGCG AGCGCCGGGTGCTCTACGGCCATGTGTTCCGCAACGCCATGTTGCTGGTGGTGGCCGGGCTGCCGGCGGCGCTGGTCTCGGTGTTCTTCACCGGGTCGCT GCTGATCGAGGTGCTGTTCTCCCTCGACGGCCTCGGCCTGATGGGCTACGAAGCGGCGCTCGGCCGCGACTACCCGGTGGTGTTCGGCAGCCTGTTCATC TTCACCCTGCTCGGGTTGCTGGTGAAGCTGGCCGGCGACCTGGCCTACAGCCTGGTCGACCCGCGCATCGACTTCGCCGCGAGGAAACAGTGAGATGGCC
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| DNA Sequence for Gene |
>ACO71_RS23105
ATCGTCCTTTCCCCGCTGCACCGCCGCCGCCTCGCCGCGTTCCGCGCCAACCGCCGCGGGCGCCTGGCGCTACGGCTGTTCCTCGCGCTGTTCGTCACCT GCCTGTTCGCCGAGCTGATCGCCAACGACCGCCCGCTGCTGCTGGAATACCGTGGCCAGTGGTTCCTGCCGGTGCTGCGGGACTATCCGGAAACCGCCTT CGGCGGCGAGCTGCCGTTCCCGCCGGACTACCGCGGTCGCTTCATGAGCGAACGCATCGCCCGCGACGGCTGGGCGCTGTGGCCGCCGATCCGCTTCGAC GCCCGCAGCATCAACTACGCGCGCCCGGCGCCGGCGCCGCCCTCGGCGGAGAACTGGCTGGGTACCGACGACCAGGGCCGCGATGTGCTCGCGCGGGTGA TCTACGGCCTGCGCCTGTCGATCCTCTTCGCCCTCGGCCTGACCCTGGCCTCGTCGTTGCTGGGAATCTGCGCCGGCGCGGTGCAGGGCTACTACGGCGG CTGGATCGACCTGTTCGGCCAGCGCTTCATCGAGGTCTGGTCGGGTCTGCCGATGCTTTACCTGCTGATCATCCTCGCCAGCCTGGTGCAGCCCGGGGTC GGCTGGCTGCTGGCGATCATGCTGCTGTTCTCCTGGACCAGCCTGGTCGACGTGGTTCGCGCCGAGTTCCTGCGCGGTCGTCACCTGGAGTACGTCAAGG CGGCGCGGACCCTCGGCCTCGGCGACGCCGGGGTGATGTTCCGGCACATCCTGCCCAACGCCATGGTCGCGACCCTGACCTTCCTGCCGTTCCTGCTCTG TGGCGCGGTGACCACCCTGACCGCCCTGGACTTCCTCGGTTTCGGCCTGCCGCCCGGCTCGCCGAGCCTTGGCGAACTGGTCGGGCAGGGCCGCGACAAC CTCCAGGCGCCCTGGCTCGGGCTGACCGTGTTCGTGGTCCTGGCGACCTTGCTCAGCCTGCTGGTGTTCATCGGCGAAGCGGTGCGCGACGCCTTCGATC CGAGGAAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GATGAACCGGGAACTGTTGCGAGTGGAAAACCTGAGCGTCGCCTATGGCGACACGCAGGTCGTGAAGGGGATCGACTTCAGCCTGCGCGCCGGCGAGACC CTGGCCCTGGTCGGCGAGTCCGGCTCCGGCAAGTCGCAGACCGCCCACGCCCTGCTGCGCCTGCTGCCGGGCGCGGCGCGCCTGGGCGGCAGCGTGCGCC TGGACGGCGAGGAACTGCTCGCCCTGTCGCCGCAGGCATTGCTGGCGATTCGTGGGCAGCGCATCGGCATGGTGTTCCAGGAGCCGATGACCTCGCTCAA TCCATTGCAGCGCATCGGCCGCCAGGTCGGCGAGGGCCTGCGCCTGCATCGCCGCCTGCGTGGCGCCGCGCTGCGCGGGCGGGTACTGGAACTGCTCGAA CTGGCCGGCCTCGAGCAGCCGCGACGCCTGCTCGAGGCCTATCCGCACCAGCTCTCCGGCGGCCAGCGACAGCGAGTGATGCTGGCCATGGCGCTGGCTT
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| Amino Acid Sequence |
>ABC transporter permease
MVLSPLHRRRLAAFRANRRGRLALRLFLALFVTCLFAELIANDRPLLLEYRGQWFLPVLRDYPETAFGGELPFPPDYRGRFMSERIARDGWALWPPIRFD ARSINYARPAPAPPSAENWLGTDDQGRDVLARVIYGLRLSILFALGLTLASSLLGICAGAVQGYYGGWIDLFGQRFIEVWSGLPMLYLLIILASLVQPGV GWLLAIMLLFSWTSLVDVVRAEFLRGRHLEYVKAARTLGLGDAGVMFRHILPNAMVATLTFLPFLLCGAVTTLTALDFLGFGLPPGSPSLGELVGQGRDN LQAPWLGLTVFVVLATLLSLLVFIGEAVRDAFDPRK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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