Pseudomonas aeruginosa LESB58, PALES_32521

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other LESB58 genes in this class
Membrane proteins Other LESB58 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR47234 - - - 1 880 0.0
Gene3D G3DSA:2.170.130.10 - IPR037066 TonB-dependent receptor, plug domain superfamily 36 179 2.2E-35
CDD cd01347 ligand_gated_channel - - 62 880 1.89035E-86
FunFam G3DSA:2.40.170.20:FF:000043 Uncharacterized protein - - 281 880 0.0
SUPERFAMILY SSF56935 Porins - - 43 880 2.38E-107
Pfam PF07715 TonB-dependent Receptor Plug Domain IPR012910 TonB-dependent receptor, plug domain 58 170 1.8E-24
Pfam PF00593 TonB dependent receptor IPR000531 TonB-dependent receptor-like, beta-barrel 366 879 8.9E-54
Gene3D G3DSA:2.40.170.20 - IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily 181 880 8.6E-74

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.