Pseudomonas aeruginosa LESB58, PALES_32151 (opdO)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa LESB58
GCF_000026645.1|latest
Locus Tag
PALES_32151
Name
opdO
Replicon chromosome
Genomic location 3547718 - 3548947 (+ strand)

Cross-References

RefSeq YP_002440804
GI 218891937
Entrez 7177556

Product

Feature Type CDS
Coding Frame 1
Product Name
pyroglutamate porin OpdO
Product Name Confidence: Class 1
Synonyms
Evidence for Translation
Charge (pH 7) -4.31
Kyte-Doolittle Hydrophobicity Value -0.267
Molecular Weight (kDa) 44.3
Isoelectric Point (pI) 5.94

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
2Y0K TRANSPORT PROTEIN 12/03/10 Crystal Structure of Pseudomonas Aeruginosa OpdO PSEUDOMONAS AERUGINOSA 2.295 X-RAY DIFFRACTION 99.2
3SZV MEMBRANE PROTEIN 07/19/11 Crystal structure of Pseudomonas aeruginosa OccK3 (OpdO) Pseudomonas aeruginosa 1.45 X-RAY DIFFRACTION 99.2

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 25 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003356 (323 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PALES_32151
Search term: opdO

Human Homologs

References

No references are associated with this feature.