Pseudomonas aeruginosa LESB58, PALES_30681 (pslF)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa LESB58 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TTCGGCCTGCCGCTGTGGACCACCCTGCCGGAGCTGAGCAACAGCACCGCGGAGAGCAGCAACGCCTTCACCGCCAGCATCTACCGGCTGTACGGGCTGC TGCCCTACGCGCGCATCGAGGAAAAGGGCCTGACCCTGGGCCTGACCTCGGCGCGCCACGGCGAAGGTGTGACTTTCATCATCGAGCAACTGCGCCGTCT GCTGGAGGAAAACGGCGTGCGCGTGCGGGTCGGCGGCGAGCCGGCCCAGCCGGGCGAAGTGGTATTGCTCGACGCGCCGGCCCTGCTGGACAGCCGCGAG GCCTTCATCGCCCTGCGCCGCGCCGACCTGATCGCCCTGGTGGTAGAGGCGCAGAAGAGCACCGTGCCGGTGGTCGAGCATGCGCTGACCATCCTCACCA CGGCGTTCGGCAAGGTCGACGGGATCATCATCAACCGGCGCCGCTTCGAGGTGCCGAGCAAGGTCCTGCAGACCATCGCCCGCTACCGGAGCGCGTTCTG
|
|
| DNA Sequence for Gene |
>PALES_30681
|pslF
ATGCGGATCGCCCTCCTCGCGCCCCTGCCGCCGGAAAAGAATGGCATCGCCGACTACGCCAGTCATTTCCGCAACGCCCTGCAGGGTCTCGGCATCGAAG TAGCCACGCCGCTCGCCGGCGTGGCGGCCGACAGCGCGAATATCGCCAGCCGGCTGGACAGCGTCGACTGGAACGCCTTCGACCTGGTCCATGCCGAACT CGGCGGCGGCCGCCTGGGCGAGTTCATCGCCCTGCGCGAGCTGCGCAAGCGCTTCCCGCGCCTGCCGCTGAGCGCCACGGTGCACGATCCGGAGCGCATG GTCTGGCGCCGCGAGCGCCTGCCCTGGCCGCTGAACCTGCTGGAACGCCTGCCCTCTCCCCTGCCCCAGGCCGCCGTGGTGCTCGCCGACCCGCTGACCC TGCGCGAAGAGCGTGCCGTGGCCCAGGGCCTGACGCGCCTGGTGACCCTCACCGGCCTGGGCGGCGAGTGCCTGGCCCGGCGGATGCGCCTGCCGCCCGG GCGGGTCGAGGTGATCAACCACGGCAACCTGGAGATCGCCACGGTGCCGCTGCCGTCGCTGGACACCCTGCGCCTGCTGTACTTCGGATTCATCTATCGC GGCAAAGGCATCGAGGACCTGCTCGAGGCCCTCGCCGACCTGTTCGCCAGCGCGCCGGAGATGCGCCAGCGCGTGCGCCTGACCCTGGCCGGCGGCACCG CCGCGGAAATGGCCTTCGGCGCCGGCGGCAACTACCTCGACCAGTTGAAGGCACAGATCGCCGAGCTTGGCCTGGCCGACGCCATCGACTGGAACCTGAA CCTGGCCGCCGCGGACATCCCGCGTACCATCCAGGCCCACCACGTGATGGTCCTGCCGTACCGCGAGTCGAAGAAACTCGGTCTGCTCGGCCAGCAGCGC GGCACCAGCGGCGCCCTGTCCTGGGCGGCAGCCTGCGGGCGCGGCGCGATCACCTCGGACGCTCGCGCCTTCGCCGAGGAAGTCGCCAGCGGCAACGGCG CCATCTACCCTCAGGGAGACGTGGCAGCCCTCTCCGAACAGTTGTTGAACCTCGCTCGCGAACCCCGCCTGGCACAGGCCTGGGCCGAGCGCGCCGGAGC GATCGGCCATGCGCGGACCTGGCCGCGCACCGCGCTGCGCTTCCAGGCACTGTTCAACGACATGGTGGGAACCGTTCATGGCACGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GGGACTCTATCTGGGCGGCAGCGCGCTGCTGCTCGCCGTGGTACTGCTGCTGGTGTTCTGGGGGCGTCCCGCCGACGCCGAGATCCAGGTACTGAAGGCG CCTCGCGCGGTGGTCTGGAAAGACTTCCTCGGGGTCAACGCGCAGTTCCTCTGGTTCAGCCCGGAGCGTTACAACAAGCAGATCGACCGCCTGCAGGACC TGGGGCTGGAGTGGGTGCGCCTGGACCTGCACTGGGACCGCCTGGAAACCGCCGAGGACCAGTACCAGCTGGCCTCCCTCGACCAGTTGGTCAAGGATCT CGAGGCGCGCCAGCTGAAGTCGGTGTTCTACCTGGTCGGCTCGGCCCGCTTCATCACCACCGCGCCGTTCTACTCGCCCTTCCAGGACCAGTATCCGCCG CGCGACCCGGAAGTCTTCGCCCGGCGCATGGCGATGCTCTCGCAGCGCTACCCGAGCGTGGCCGCCTGGCAGGTATGGAACGAGCCCAACCTGATCGGCT
|
|
| Amino Acid Sequence |
>putative glycosyl transferase
MRIALLAPLPPEKNGIADYASHFRNALQGLGIEVATPLAGVAADSANIASRLDSVDWNAFDLVHAELGGGRLGEFIALRELRKRFPRLPLSATVHDPERM VWRRERLPWPLNLLERLPSPLPQAAVVLADPLTLREERAVAQGLTRLVTLTGLGGECLARRMRLPPGRVEVINHGNLEIATVPLPSLDTLRLLYFGFIYR GKGIEDLLEALADLFASAPEMRQRVRLTLAGGTAAEMAFGAGGNYLDQLKAQIAELGLADAIDWNLNLAAADIPRTIQAHHVMVLPYRESKKLGLLGQQR GTSGALSWAAACGRGAITSDARAFAEEVASGNGAIYPQGDVAALSEQLLNLAREPRLAQAWAERAGAIGHARTWPRTALRFQALFNDMVGTVHGT
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|