Pseudomonas aeruginosa LESB58, PALES_28981 (fpvA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa LESB58 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCCTCTGTCGTAGCCAGTCATATCCGTGCTCAGGTGGCGGAGAAACCTGTTCGCCATGGCCTCACGGCGGATGAGCTGATTGGTGTGTTCGAAACCGTGG CGACCTTGCGCAAGCTCTGCTGGGATGCCGCCGAACTCGCAGGGCTCGTTGCCGGGGTTCATTGCTGGTGGGTCGAAGGGCGCGAGGCGGAGGCGCGGCA GTTCCAGGCGCAGATGTCTTTCACCTTGGCGCGAGAAACCTTCTGCCAGGCCGAGCACGACACGATCATGCAGGACGAGCGCCTGTTGCAGGAGCTTGAC GAGGCTAGCGAGCGGTCTTTGAAGCAACGTACGTAGCGCGTCGACAAACGAGGGCCGGGCCGGGTTTTACCTACAGGTAAACCCGGCCCGGGTATGTCCG GGGTAACGAAATACGACAGTTGAGTTTTTTTTCCGGTTTTTCCTGCTGAGACGTCTTTGTAATTGATAAGTATTCTTAAATATTTATCCATACGAAATAT
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| DNA Sequence for Gene |
>PALES_28981
|fpvA
ATGGAGAAAAACATGCCAACAGCACATGCGGTTTCCCCTCTGGCAAGGGCTTTAGGAAGTTTGGGGGCAAACAAGATGTCCAGGCTTGGCCTGGCCCTTC TGCTGGTGAGCGCCCAGGCGGTCGCGCAGGAGTACGAATTCAACGTTCCCGCCCAGCGGCTCGACGCGGCGCTTCAGGCGCTTGGCCGCCAGGCGGGTCT GCAGGTGCTCTACAACCCGAGCGACCTGAGTGGTCTGCGTAGCCGCAGTGTCAGCGGCAAACTCGAATTGGAACAGGCGATCAGCCAACTGCTGGATGGG GCCAACGGTATCGGTTTCGAACTGCAGGGCAAAACCCTGATCCTGCGCCTGCAGGACTCCTCTTCGGTGATATCCCTGGATTCAATGGTGGTTTCAGGCC TGGCGCTGAATCCCACTACTGAGAACAGCGGCTCCTATGCCTCGCCTGCGGTGTCGATCGGCAAGGGCAACAAGAGCATCAAGGAAATTCCCCAATCGGT GACGGTGGTCACCCAGAAACGGATGCAGGACCAGAACATGTCCACCGTATCCGATGTCCTGGCCAACGCGCCGGGCGTTACCTCCATCCCGATGTTCGGT ACCGGCGAGCAGTACTACTCTCGCGGTTTCTTCATCGAAAACTTCCAGTACGACGGTGTACCCCTGGAGCGCCAATCCTATGCCCGTGGTTCGGACTTCA GCGGGCAGACCGCGATCTTCGATCGGGTAGAGATTCTCCGGGGTGCGCAAGGTCTGCTGGAGGGCGGCGGCAATCCCTCGGGCTCGGTCAACTTCGTGCG CAAGCGACCGACGGCGGAGAACCAGGTCCGGCTGACTGCCAAGGCCGGCTCCTGGGATCACTATGGTACCCAGGCCGATATCTCCGGCCCGATCGACGAA CAGGGAAGACTGCGAGGGCGCCTAGTTCTCGACTACGACACCAAGAACTCGTTCGTCGACCACGTAGGCGATGACCGCCAGACCATCTATGCCGCGCTCG ATTACGATCTTACGGAAGCTACACGCCTCGGCTTCGGCTTCAGTCGCGAGCGGATCGACGCCAACATCGATGTCAACGGCTTGCCCAACTATACCGATGG TTCGATGCCGCATTTCAGTCGCTCGACTTTCCTCGGCGGCGACTGGTCCTACTGGGACAAGATCCAAGAGACCTTCTACTTCGATATTGCCCACCAGTTC AACGAAGACTGGTCGTTGAATGCCACGGTGGTCAATGCGCGCGAGAAGAACGACTACAAGTACCTGCTGATGGCCGGCAGCATCAATCCGGACAATACCA GTACGCTGCGGGGAGATGCCTACGTCTTCGACTTCTTTTCCGAGCACTGGGGCGGGGATGTCTATGTCAATGGTCGTACCAAGGTTGCCGATCGCCAGCT GAACCTTACATTCGGGGCGAACTATTCGGACCTGGACAGCAGCGATACCTTCGGCTGGAGGCAGCGCTACGTACCCAACTGGGATATCTTCAACTCGCCG GTCAATACCAACAAACCATCCGATGACGACATCTATTCCGTCAGGCGCAGCGACGATGGCTACGCTTCGATCCAGAAAGGCGTCTACGGCATGGGGCAAT ACTATCTGACCGACGACCTGTCCGTAGTGCTCGGGACTCGCATTTCGTCCTACCAGAAGGCTTATACCTCCAATGGGCCTTGGGGTTATTCGAAGGCGGT GGCCAAGGAGTCGGCGAAGGCCATTCCCTATGCCGGCATCATCTACGACCTCAATCCGGAGTGGAGTGCGTATGCCAGCTTCACCAAGATCTTCCTTCCG CAGTCGGTGCGTACCGCGAGCGGCAGCATCCTGGGACCGAAAAGCGGGAAAAGCGTCGAGACCGGTCTGAAAGGCATCCTCAACGATGGCCGCTTGAATG CCACCTTCGCGCTGTTCCGCATGGAACAGGACAACATCCCGATCCAGGACGCCAACCTGCCCGATGACGTTCAGGAAGCCAACTGCGGCGGTACCTGCTA CCACGGCGGCGGCAAGGCTATCAGCCGCGGCTTCGAGACCGAGCTCAGCGGCGAGTTGTTCGACAACGTGCAGGTATATGCCGCCTACACCCTCAACCTG CTGCGTTACCAGGGCGAGGTGCCCAGCGAAGCGGATGACGTTGGCGCCAGCGTCAATACACCGAAGCACATATTCCGCTCCTGGGTCGACTACCGGTTGC CGGGCAATTGGTCGCGGGTATCCGTCGGCGGCGGCGTCAATGCACAGAGCCGGTCGGCCGGGTTCGGCTACTACGGACGGGAGCAGAGCGGCTTCGCGGT ATGGAACAGTCGCCTGGCTTATCGCTTCACCGAAGAGCTGACCGGTGCGATGAACGTCAACAACATTTTCGACAGGCGCTACTTCAAGTCCGTCGACTAT GGCCACAACTACTTCGGCGATCCGCGCAACGTGCTGTTCACGCTTACCTATAGCTACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCTGCTGACGGCCGGTCATCGGGCCTGCCGGAACGGGAACTGTACGAATGCCGGCCTTCGGGCCGGCTTTTTTCTATCCGTTCGGAATCCGGGTGACGGC CAGCAGGGTTGTTGGCGATTCTCGTCGGCTGGTCCGTGACGAGCACGACGGTGCGTCATTGCCGGCAGTGCAGGCACAAAGATAGAGGCGCGCAGCTAAT GTTGGGCGACTGGGCGACTGGGCGACTGGGCGGCGGCGATGTCTTCAGCACGCTTCGCAGTAGAAGAGAGGGAGTCGAGAGACGCAGAGACGGGCTGGCT GAGCGGGCGATACGACGTGTGGAAAGGCGGTTTGTCGGGGTGAGCTTCGCTGCTGCCTCACCGCGAGGCGGGAAGGGCGGACGGGACGCCATGGTGTCCC GTCAGGCTGATGTCTATCAGGCGGGGTGCAGCGCGGGTTCCACAATCTGGCCGGCGTGCATATGTACCAATTTGTCGGCGATGTCGAAGTAACGGTCGTC
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| Amino Acid Sequence |
>FpvAIII
MEKNMPTAHAVSPLARALGSLGANKMSRLGLALLLVSAQAVAQEYEFNVPAQRLDAALQALGRQAGLQVLYNPSDLSGLRSRSVSGKLELEQAISQLLDG ANGIGFELQGKTLILRLQDSSSVISLDSMVVSGLALNPTTENSGSYASPAVSIGKGNKSIKEIPQSVTVVTQKRMQDQNMSTVSDVLANAPGVTSIPMFG TGEQYYSRGFFIENFQYDGVPLERQSYARGSDFSGQTAIFDRVEILRGAQGLLEGGGNPSGSVNFVRKRPTAENQVRLTAKAGSWDHYGTQADISGPIDE QGRLRGRLVLDYDTKNSFVDHVGDDRQTIYAALDYDLTEATRLGFGFSRERIDANIDVNGLPNYTDGSMPHFSRSTFLGGDWSYWDKIQETFYFDIAHQF NEDWSLNATVVNAREKNDYKYLLMAGSINPDNTSTLRGDAYVFDFFSEHWGGDVYVNGRTKVADRQLNLTFGANYSDLDSSDTFGWRQRYVPNWDIFNSP VNTNKPSDDDIYSVRRSDDGYASIQKGVYGMGQYYLTDDLSVVLGTRISSYQKAYTSNGPWGYSKAVAKESAKAIPYAGIIYDLNPEWSAYASFTKIFLP QSVRTASGSILGPKSGKSVETGLKGILNDGRLNATFALFRMEQDNIPIQDANLPDDVQEANCGGTCYHGGGKAISRGFETELSGELFDNVQVYAAYTLNL LRYQGEVPSEADDVGASVNTPKHIFRSWVDYRLPGNWSRVSVGGGVNAQSRSAGFGYYGREQSGFAVWNSRLAYRFTEELTGAMNVNNIFDRRYFKSVDY GHNYFGDPRNVLFTLTYSY
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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