Pseudomonas aeruginosa LESB58, PALES_19621 (xcpW)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0015628 protein secretion by the type II secretion system
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA3098
 ECO:0000249
sequence similarity evidence used in automatic assertion		 9818381
Cellular Component GO:0015627 type II protein secretion system complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF11612
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015628 protein secretion by the type II secretion system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF11612
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Protein secretion/export apparatus Other LESB58 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.10.610.10 - - - 36 143 1.4E-33
PANTHER PTHR39583 TYPE II SECRETION SYSTEM PROTEIN J-RELATED - - 1 207 8.5E-67
NCBIfam TIGR02532 JCVI: prepilin-type N-terminal cleavage/methylation domain IPR012902 Prokaryotic N-terminal methylation site 4 27 3.9E-9
SUPERFAMILY SSF54523 Pili subunits IPR045584 Pilin-like 39 204 3.09E-46
Pfam PF07963 Prokaryotic N-terminal methylation motif IPR012902 Prokaryotic N-terminal methylation site 1 27 6.0E-10
Coils Coil Coil - - 47 67 -
Gene3D G3DSA:2.10.70.20 - - - 146 202 2.6E-14
MobiDBLite mobidb-lite consensus disorder prediction - - 203 237 -
NCBIfam TIGR01711 JCVI: type II secretion system minor pseudopilin GspJ IPR010055 Type II secretion system protein GspJ 5 199 4.5E-92
Pfam PF11612 Type II secretion system (T2SS), protein J IPR010055 Type II secretion system protein GspJ 57 197 4.5E-45
SUPERFAMILY SSF54523 Pili subunits IPR045584 Pilin-like 7 47 2.67E-5

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.