Pseudomonas aeruginosa LESB58, PALES_19081 (wzz)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009103 lipopolysaccharide biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02706
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02706
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Cell wall / LPS / capsule Other LESB58 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Lipopolysaccharide biosynthesis ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF02706 Chain length determinant protein IPR003856 Polysaccharide chain length determinant N-terminal domain 2 87 1.0E-9
Coils Coil Coil - - 162 204 -
Gene3D G3DSA:3.30.1890.10 - - - 24 296 2.8E-53
PANTHER PTHR32309 TYROSINE-PROTEIN KINASE - - 3 332 3.6E-20
SUPERFAMILY SSF160355 Bacterial polysaccharide co-polymerase-like - - 32 295 8.63E-57

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.