Pseudomonas aeruginosa LESB58, PALES_18061
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa LESB58 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GTGAGCAGATGACGCTGGCGACGCGCATCCTCGATTTCCAGCAGCAGGCTATCCCAGTGTTTACGGCTGATCAGCACACTCAAGGTCAGGCCCCCGTCGC TTTGCCCAGCACACGCTCCAGGGCGAACAGGATGGCCTCGCTGGCCTCGCGTTCGCCGCGTTCGATCATCGCCATGTAGGAAGGACTGATACCGACCTCC CGGGCCACCTGTTCCAGGCTCAGGCCGCGCGCCTCGCGGCGCTCCAGCAGGCTCGCGGAAGGCGGCGCCGGCGCGGTCGTCTCCACCGCGACACTGGCGG CCGGGCGACCAGCGGCGGCCAGCAACGCCTGGTATTCGGCCCAGGGCAACACCGCGTATTCCGCCTCGCCGTCTCGCGTGATCACTTGGACATTCATGTC GGTCTCCTTGCAAGCCGCCATCTTATCAGGCACCGCGCCGCTGCGGACTGGCTATACTGCTGCCCTGGTCACACAGTCTGCCTGGTGGAGGAGCCCACGG
|
|
| DNA Sequence for Gene |
>PALES_18061
GTGCGCCGGAGAAGTCTTGGTTTGTGCATCCTGCTGGGAGTCGGACAGGCCTTCGCCGGCGAGCTGCGCTGGGGCTTCAGCCCCGCCGACGGCATGCCCT ACGTGGACATCGTCGACCACCAGCTGCAAGGCGGCTTCACCCGCCAGTTGGGGGAGCGGGTCGCGCAGCGGCTGGGATTGTCGCTGCGTTTCGTGGAAAC GCCGAACCGAAGGATCGACGGCTTCATGGCCAGCGGACATATTCACGTGATCTGCAACTCCAACCCCGAATGGGATAGCAAACCCGAACGCTACCATTGG TCTCCCGCCCTCTTCGAAGAGCAGGACGTCCTCCTGCAGCGCGACGACCGTCCGGCGATCCGCGACTTCGCCGAGCTGCGCGGCAAGACCCTGGGTACAA GTCTAGGCTATGTCTACGCGGACGATCTCATGCAGGCCTTCGCTGCCGGGGAAATTCGCCGCGAAGATACCCGCGACCTGGCCAGTCGCGTGCAGATGCT CAAGCGTTCGCGCCTGGACGCCGCGGTGGACATGCGCCGCCCGCTGCTCTACCTGACGCGCCAGCATCCCGAGCTGGGCCTGAGCGTCAGTCCGCTGGTA CTGCAGAGCTATCGGATGCACTGCATCTATGGCGGACAACTGCCGGTCCCCGTCGAAAGTATGGACCGGGTGCTCGACGAGATGGTCAGGGACGGCAGCA TCGGGCGCCTGCTGGAAAACAGCCTGCAAGCGCCTCAGGAACCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
ACGCGCTCCGCCCTGGGAGCCGGCAGCTCTCGCAGCGCCTGTTGCGTCTCGACGCCCTGGGCGTCGCGCCAGACCTTGAAGGCATCCAGCTCGGCCTGCC AGCGACGCACTACCCAGGCCAGGACGGCGAGATCGTCGAGCAGGCCGACACCGAAGATGAAGTCGGGAACGATATCCACCGGCGAAAGGAAATAGGCCAG CGCCGCGATCACCGAGAGCAACGCCTGGCGGCTGAGTCCGCGGTATTCGCCGCGAACCCAGGCCACCAGCAGTTCCTGCAGCAGGCGCAGGTCGCTCTTC ACCAGCTTCAGGCGCGAGCGCTTGCGTGCTACCGCAATCAACAAGGCGGGCACCCGGCCACGGGCCAGGAAACGTTCCGCGATCCCCAGGTAACGACTGA ATCCTCGTGGTGCATCCATCCTTCCACCTCGCTCAAGCGCTTGCCGCCGAGGCTCTCCGGGTTATCCACGCATACTGTGGATAACCTTGTGAACAGCCCC
|
|
| Amino Acid Sequence |
>putative periplasmic binding protein
MRRRSLGLCILLGVGQAFAGELRWGFSPADGMPYVDIVDHQLQGGFTRQLGERVAQRLGLSLRFVETPNRRIDGFMASGHIHVICNSNPEWDSKPERYHW SPALFEEQDVLLQRDDRPAIRDFAELRGKTLGTSLGYVYADDLMQAFAAGEIRREDTRDLASRVQMLKRSRLDAAVDMRRPLLYLTRQHPELGLSVSPLV LQSYRMHCIYGGQLPVPVESMDRVLDEMVRDGSIGRLLENSLQAPQEP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|