Strain | Pseudomonas aeruginosa 2192 supercont1.1 genomic scaffold, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGTGGCGTTGGTCTCGAAGACGTTCTGCACCATCACCGTGTCGATGCTGATGCCGTAGCTGCCCATGAAGTAGGTCGCGCCGGCCGAGCACAGGGCGACC AGGGTCAAGGCCGGCTTGAGCAGCGGGCGGAAGGAAACCAGGGTCAGCAGGAGCGTGAAGGCGGCCCACAGGAACGCCGCGAACGAAGCGAAGAACGCGA AGCCCTTCAAGCCTTGCAGCGGTACCAGGCCATGCAGGGCCTTCCAGGTCGCCGCGTTGTAGAACACCACCAGAACCAGCGCGAACAGCATCACCAGCCG GGTCGAACCGATAGCCGGCAAGAAACGCTTGATACCCCCACCCATTGAAGCAACTCCTGAAACGTAACGGACCGCCGCCACCCCCCGTGGCGGGGCGCCC GAACTCTATCGGGCGCCTGGTCAAAATTTCGTGAAGCCTCGCGAGCCCTCGCGGGCGCAGCGATCATGCCCGTGGCGATGGAGCCGGAACAAGCTCAGCT
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DNA Sequence for Gene |
>PA2G_02724
ATGCCTTTTCTCCCCGGGAAGATGCCGAAACCGGCCGTATGTCGGCGGCCAGCGACTTCCTTCCATGCCGACCTTGCAGGTGGCTCCCGCTATCTATACT GGAAGCACAATGCCACCCCCATCCCCAGCCCGCGCCCGCGCCGTCCGCGGGTTTTCCGTGTCCAGGGAGACACCGCTATGGATTGGCAAGGCCTGCGCTT CCTCGGAGAGTCTCCCGTCGACGGCTACGTGCTGCAGAACTGCACCTATTCTCCGTCGCTGGTGGCGCTCGCCTTCCTCGTCGCCTGCCTCGCCGGGTAC ACGGCGCTGGACATGGTCGAGCGGGTCGGCAACAGCCTGAGCCACCCGCGCCGCTGGCAATGGGTCGGGGCGTTCTGCCTGGGCAGCGGCATCTGGGCCA CGCATTTCGTCGCCATGCTCGCGTTCCACGCGCCGATCGCCCTGCGCTACGACCTGCCGATCACCGGCCTGTCGCTGCTGATCGCCGTCGCCGCCTCGTA CCTGGCGATGTACATGACCGCCCGCCCGCGCTTCGGCTTGCTGCCCTGCCTGCTCGCCGCCTGCTGCATCGGCCTGGGCATCGCCGCCATGCACTACACC GGGATGGCGGCGATGCGCTCGGTGGCCACCCAGTACTACCAGCCATCGCTGTTCGCCCTTTCGGTACTGATCGCCATCGGCGCCGCCTTCACCGCCCTCG CCGCGGTCCCCTACCTGCGCGGCCGGCGCAGCGCGCGCTACCGCTACATGAAACTGATCGCCAGCCTGCTGCTGGCCGGCGCCATCGCCGCCATGCATTT CACCGGGATGGCCGCGCTGGTGCTCAGCGTACCCGCCGGCACGCCGCTGGAACTGCAAGCCAGCGCCGACTCGCTGCGCCTGGGCTGGCTCACCGGAGTG CTCGCCAGCGCCATCGCCGCCTGCGGCATCTGGGCCGCATGGTCGGAGAAACAACGGGAGCGCCGGCTCAGCGAAAACAGCCGGGTCAACGCCCTGCTCA ACCAGCTCGACCACGCCCACGCCTCGCTGCGCCAGATGGCTCGCTACGACAGCCTGACCGGCCTGCAGAACCGCACGGCATTCAACGAAGTGTTCGTCCA GCACCTGGAGAACTGTCGCCTGAGAGGCAAGGGCCTGGCGGTGATGTTCCTCGACCTCGATCACTTCAAGCGGATCAACGATTCCCTCGGCCACGACTCC GGCGACGAACTGCTGAAGATCGTCTCCGAACGCATCCGCAGCGTGTTGCGCGATAGCGACGTGGTGGCGCGCTTCGCCGGCGACGAGTTCTGCGTGCTCG CCGACCTCACCCAGGACCACGAGGCACACATCCTCTCGCAACGCCTGATGCAGAAGATGAAGGAACCCATCGCCCTGGACGGGCGCACCCTGGTGATGAC CGTCAGCGTCGGCGTCAGCCTCTACCCGAACGACGGCGAGCAGTGCGAGGAGCTGCTGAAGAACGCCGGCCTGGCCCTGCACCAGTCCAAGGCCTGCGGG CGCAACAACGCGCAGTTCTTCAGCCGGCAACTGCTGGTGCGGGCGACCCAGGAACTGCAGATGGAGGAGGAACTGCGCCAGGCCCTGCGCGACGACCAGC TGGAGCTGCACTACCAGCCGATCCTCGCCCTCGCCGACGGCGAGGTACACCAGTTGGAGGCATTGGTGCGCTGGCGCCATCCGACCCAGGGCCTGCTCGG TCCGGACCGCTTCATCGGCCTGGCCGAAGCCAACGGCATGATCGACCAGCTCGACGACTGGGTGCTGCGACGCGCCTGCCGCGACCTGCGCAGCCTGCAC CTGGCCGGCCACGAACGGCTGCGGGTGGCGGTCAACTGCTGCGCCAGCAATCTCGGCCGGGCCAGCCTGGTCGACGAAGTCCGTCATGCGCTGGAGCAGG CAGGGCTGGCGGCGTGCTTCCTCGAACTGGAGGTGACCGAGGACGCGCTGATGTACAACATCGACCAGACCATCCCGCTGCTCGAACGCCTCCGCGAGCT GGGCGTCAGCCTGTCGATCGACGACTTCGGCACCGGCTATTCGTCGCTCGCCTACCTGCGGCGCCTGCCGCTGGACGCGCTGAAGGTGGATCGCTCGTTC ATCATGGACATCCCCGCCTCGCAGCGGGACATGGAAATCGCCCAGGCGATCATCGCGATGGCCCAGAAGCTCCATCTGAAAGTCGTCGCCGAGGGCGTGG AGACTCCGCAGCAACTGGCGTTCCTGCGGGAGAACCATTGCGAGCTGGTGCAGGGCTACCTGTTCAGCCGGCCGCTGCCGCTGGCGGCCCTGGAAGAGTT CCTCCGCGCCTACCGCTTCGACGCCGCGCCGCCGCTGCGCAGCCTGAACCAGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGTTCACTCGACGGCGGTCCGGTATTGCTCCACCAGGGTCGCCGGATCGCGTTCGAGATAGCCCTGGCTGCCGTGCAGACGCATCAACTGCGCGGCCAAC CCGCTCATCGGGGTGGCCGCGCCTTGCTCGCGGGACAGCTTCACCGCGGTATCGAGATCCTTGAGCAGGGTCCGTACGTGCCACTTGACCGGCTCGTAAC GGCTCTCGGCCATTTGCGGGGCGAGGATCTGCAACGGCTTCGAGTCGGCGAAGCCGCCCGCCAGCGCCGGAGCGACCAGGCTGGCGTCGACCCCGGCCCG CTCCGCCAGCGCCACCACTTCGGCGATCACCAGGGCGTTGCAGGCAACGATCATCTGGTTGCAGACCTTGGTCACCTGCCCGGCGCCCACCTCGCCCATG CGCGTCAGGCGCTGGCCGAGCTGGGAGAGGACCGGCCGCAGGCGCTCGATATCCGCTGCGCGTCCGCCGGCCATGATCGCCAGGCTGCCGCTTTCCGCGC
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Amino Acid Sequence |
>diguanylate phosphodiesterase
MPFLPGKMPKPAVCRRPATSFHADLAGGSRYLYWKHNATPIPSPRPRRPRVFRVQGDTAMDWQGLRFLGESPVDGYVLQNCTYSPSLVALAFLVACLAGY TALDMVERVGNSLSHPRRWQWVGAFCLGSGIWATHFVAMLAFHAPIALRYDLPITGLSLLIAVAASYLAMYMTARPRFGLLPCLLAACCIGLGIAAMHYT GMAAMRSVATQYYQPSLFALSVLIAIGAAFTALAAVPYLRGRRSARYRYMKLIASLLLAGAIAAMHFTGMAALVLSVPAGTPLELQASADSLRLGWLTGV LASAIAACGIWAAWSEKQRERRLSENSRVNALLNQLDHAHASLRQMARYDSLTGLQNRTAFNEVFVQHLENCRLRGKGLAVMFLDLDHFKRINDSLGHDS GDELLKIVSERIRSVLRDSDVVARFAGDEFCVLADLTQDHEAHILSQRLMQKMKEPIALDGRTLVMTVSVGVSLYPNDGEQCEELLKNAGLALHQSKACG RNNAQFFSRQLLVRATQELQMEEELRQALRDDQLELHYQPILALADGEVHQLEALVRWRHPTQGLLGPDRFIGLAEANGMIDQLDDWVLRRACRDLRSLH LAGHERLRVAVNCCASNLGRASLVDEVRHALEQAGLAACFLELEVTEDALMYNIDQTIPLLERLRELGVSLSIDDFGTGYSSLAYLRRLPLDALKVDRSF IMDIPASQRDMEIAQAIIAMAQKLHLKVVAEGVETPQQLAFLRENHCELVQGYLFSRPLPLAALEEFLRAYRFDAAPPLRSLNQA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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