Pseudomonas aeruginosa LESB58, PALES_12571 (recJ)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008409 5'-3' exonuclease activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00644
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006310 DNA recombination
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00644
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003676 nucleic acid binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02272
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006281 DNA repair
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00644
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

DNA replication, recombination, modification and repair Other LESB58 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR00644 JCVI: single-stranded-DNA-specific exonuclease RecJ IPR004610 Bacterial RecJ exonuclease 20 566 0.0
Pfam PF01368 DHH family IPR001667 DDH domain 69 228 1.2E-19
FunFam G3DSA:3.90.1640.30:FF:000001 Single-stranded-DNA-specific exonuclease RecJ - - 46 322 8.7E-127
Gene3D G3DSA:3.10.310.30 - - - 323 451 2.1E-35
Gene3D G3DSA:3.90.1640.30 - - - 46 322 3.1E-85
Pfam PF02272 DHHA1 domain IPR003156 DHHA1 domain 318 446 3.4E-29
PANTHER PTHR30255 SINGLE-STRANDED-DNA-SPECIFIC EXONUCLEASE RECJ - - 17 569 0.0
SUPERFAMILY SSF64182 DHH phosphoesterases IPR038763 DHH phosphoesterase superfamily 44 459 1.02E-118
Pfam PF17768 RecJ OB domain IPR041122 RecJ, OB domain 463 566 5.9E-20

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.