Pseudomonas aeruginosa LESB58, PALES_02171
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa LESB58 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GGATCCTTGCCGCCATCGAGCGGGCGCAAGGCGAGGGCGCGACCCTGCTCGGCGGTGGTCGCCAGTTGACGATCAACGGTTCGGACAACTTCATCGAACC GACCCTGTTCGGCGACGTACGCCCGGACATGCAGCTGGCCCGCGAGGAAATCTTCGGTCCGGTGCTGGCGATCAGCGCCTTCGACTCCGAGGACGAGGCC ATACGCCTGGCCAACGACAGCCGCTACGGCCTCGCCGCCTCGCTGTGGAGCGACGACCTGCACCGTGCACACCGGGTGGCGCGGCGCTTGAATGCCGGAA CGGTGTCGGTGAATACCGTGGACGCGCTGGACGTCGCGGTGCCTTTCGGCGGCGGCAAGCAGTCCGGCTTCGGTCGCGACCTGTCGCTGCATTCCTTCGA CAAGTACACCCAGTTGAAGACGACCTGGTTCCAGTTGCGCTGAAGACGCGACGGACGCGACACGACTCGATGCCGATAACGACAACAAGAGGACGATCGA
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| DNA Sequence for Gene |
>PALES_02171
ATGAACGACACGCCGAACGTGCGTGAGCCGGCCCTGCGCCGCGTGCTCGGGCTGGGACCGCTGCTGGCGGTGGCCATCGGCCTGGTGGTTTCCCAGGGCG TAATGGTACTGATGCTGCAAGGCGCCGGGACGGCCGGCCTCGGCTTCATCGTGCCGCTGGGAGTGGCCTACCTGCTGGCGCTGAGCTACGCCTTTTCCTT TTCCGAGCTGGCCCTGATGATTCCCCGCGCCGGTAGCCTGAGCAGCTACACCGAGGTGGCCATCGGGCATTTCCCGGCGATCCTGGCGACCTTTTCCGGC TACGTGGTGGTGGCGATGTTCGCCCTCTCGGCGGAACTGCTGCTGCTCGACCTGATCATCGGCAAGGTCTACCCCGGCGCGCTGCCGCCGATGCTGGTGG CCTACGGCGTGCTCGGCCTGTTCACCCTGCTCAACCTGCTCGGCATCGACATCTTCGCGCGCCTGCAGAGCGCGCTGGCGCTGCTGATGATGATCGTCCT GCTGGTGCTCGGCCTGGGTGCGGTGAGCAGCGACCACGCTTCCGCGCAGACCGCCCTGGCGAGCGGCTGGAACCCGCTCGGGGTAAGCGCCCTGGCGCTC ACCGCGATGGCCGTGTGGGGCTTCGTCGGCGCCGAGTTCGTCTGCCCGCTGGTGGAGGAGACGCGGCGTCCGGAGCGCAACATCCCGCGTTCGATGATCC TCGGCCTGAGCATCATCTTCCTGACCATCGCCCTCTACTGCTTCGGTGCGCTGCTGTGCATCCCGCAGGCGGAACTGGCCGGCGACCCGCTGCCACACTT CCTCTTCGCCAACCGCGTGTTCGGCGAGTACGGCCAGCTGTTCCTGGTGATCGCCGCGATCACCGCCACCTGCAGCACCCTCAACTCGTCGCTGGCGGCG ATCCCGCGGATGCTCTACGGGATGGCGCAGAACGGCCAGGCCTTCCCGCAATTCAAGCAGCTCAGCCGGCGGGCGCGCACGCCCTGGGTGGCGGTGCTGT TCGTCGCCGCGATCACCGGCCTGCCGATCCTGATCCTCGGCCAGGACCCGGACTCGATCAACCTGCTGCTGCTCGCCGCCGCGCTGGCCTGGCTGCTGGC CTACATCATCGCCCACGTCGACGTGCTGGCCCTGCGCCGTCGCTATCCGCACATCGCCCGTCCGTTCCGCACGCCGTTCTACCCGCTGCCGCAACTGTTC GGCATCGCCGGGATGATCTACGCGGTGGTCCACGTCTCGCCGACCCCGGAAATGACCGGACGGATCTTCGCCAGCGCCGGCGTGGTGCTCGGCGTGGTCT CGCTGGTGGCGGTGGTGTGGATCAAGGGCGTGATGCGCAAGCCCCTCTTCGTACCCGAACCGCTCGAGACGGCCGGTGAGACTGCCCAGGGCAAGTCCGT CGCCCTCGATCCCCTGCAATCCCCTTCGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGCGCCAAGGGAACAAGGAGAACACAGACGATGACCGCTCAGCTCAACCCGCAGCGCGACACCCGCGACTACCAGCAACTGGACGCCGCGCACCACATCC ACGCCTTCCTCGACCAGAAGGCGCTGAACCGCGAAGGCCCGCGGGTGATGGTCCGCGGCGATGGCCTGCAGCTCTGGGACAACGACGGCAAGCGCTACCT GGACGGCATGTCCGGCCTCTGGTGCACCAACCTCGGCTACGGCCGCCAGGACCTCGCCGCCGCCGCCAGCCGCCAGCTGGAACAACTGCCGTACTACAAC ATGTTCTTCCACACCACCCACCCGGCGGTGGTGGAGCTTTCCGAGATGCTCTTCAGCCTGCTGCCGGACCACTACAGCCACGCGATCTACACCAACTCCG GCTCCGAGGCCAACGAGGTGCTGATCCGTACCGTGCGGCGCTACTGGCAGATCCTCGGCAAGCCGCAGAAGAAGATCATGATCGGCCGCTGGAACGGCTA
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| Amino Acid Sequence |
>amino acid APC family transporter
MNDTPNVREPALRRVLGLGPLLAVAIGLVVSQGVMVLMLQGAGTAGLGFIVPLGVAYLLALSYAFSFSELALMIPRAGSLSSYTEVAIGHFPAILATFSG YVVVAMFALSAELLLLDLIIGKVYPGALPPMLVAYGVLGLFTLLNLLGIDIFARLQSALALLMMIVLLVLGLGAVSSDHASAQTALASGWNPLGVSALAL TAMAVWGFVGAEFVCPLVEETRRPERNIPRSMILGLSIIFLTIALYCFGALLCIPQAELAGDPLPHFLFANRVFGEYGQLFLVIAAITATCSTLNSSLAA IPRMLYGMAQNGQAFPQFKQLSRRARTPWVAVLFVAAITGLPILILGQDPDSINLLLLAAALAWLLAYIIAHVDVLALRRRYPHIARPFRTPFYPLPQLF GIAGMIYAVVHVSPTPEMTGRIFASAGVVLGVVSLVAVVWIKGVMRKPLFVPEPLETAGETAQGKSVALDPLQSPSA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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