Pseudomonas aeruginosa isolate RN21, PARN21_RS30560

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGCCATCCTCCTCGCGCCAGGCCTGCAGGGTGCGCTGGCTGAGCAATGCCAGGCGCAGCAGGTGCGCGGCATTGCGGCGGTTCAGCGAGCCGCGGCAGGC CGCGAGGAAGCCCAGCAGCCAGCGCCACTGAGCCGGATCAAGACGCGGCCGCAGGCGCAACGGCGCATCGTTGCGCAGCAGCCAGCCGAGCGCCTGGGCC GGCACGCCGCTGTCGGCCAATGGCGCCACGTAGCGATAGGACAACTGCCCGCCATTGGCGTAGCTGGTTTCCAGCCCGCCCCGCTCGCGCGCTTCCACCA GGGTCACGTCGAATCCTTCGCGAACCAGGGCGTAGGCCGTGGCCAGGCCGACCACGCCGGCGCCGATGATGCAAACCCGCTGAGCCATGACAATCGTTAT CCAGGTGTTTTCCAGGGCTTCGACGATAGGTGCGGATGACAGCGGTAGGACAATGAATAAAGATGGCCAGGGTATAAATCCAGGTTATGGGATCGCGCCG
DNA Sequence for Gene
>PARN21_RS30560
ATGAAGCTCCGCCATATCGAAGTGTTCCAGGCGATCCGCCAGGCTGGCTCGGTCAGCGGCGCCGCACAGTTGCTGCATGTGTCCCAACCGGCGGTGAGCA AGGTCCTGCAGCACGCCGAGCAGCAACTGGGCTTCCCGCTGTTCTTGCGAGTGCGCGGCAAGCTGCTGGCGACTCCGGAAGCGCTGGAACTGGAGCGCGA AGTGGCCAAGCTCAGCGATAGCCTGCAGGCCGTGCGGCGCCTGGCGCAGAACCTGCGGCGCCAGCCGGGCCACAGCCTGCGCATCGGCGCCACCCCGGCC CTGGCGCTGTCGCTGCTGCCGCGGGCGATCGGCGAATGGAGCGCGCGCTATCCGCAGAGCGGCTGCGAACTGGCCACCTTGCATTCGCGCGAGCTGGTGC AGGGCCTGCTGATGCGCGAACTGGACCTGGCCCTGAGCCTGAAGCAGCCGGAACACCCCGGCCTGCGCGGCGAAGCCATCGCCAGCGGCGTATTGGTGGC CCTGGCGCCGCGCGAACACTGGCCCGAAGCGGAACGCCGGCAGCCGCTGAGCCTGGCCGGGCTGGCCGGCGAAGCGCTGATCGGGCTGTCCACCGCCGAC CCGCTGTTCGCCCGCCTGGAGGATTACCTCAGCGCCGTGGAGCCACCGCCGCAGGTGAAGATCGCCGTGCAGACCTACGCCCTCGCCCGCGCCCTGGTGG AGGCTGGGGCGGGCCTGGCGCTGGTCGATCCCTTCACCGCCCTCGGCGCCGACCCGCACAGCACCGCGATCCGCCCATTGAGCCCGGCCTTCCCGGTCAC CCTCTACGCCATCACCCGCGCCGACGAAACCCCGCCGCACACCCTCGCTCCGCTGCTGCGGATGCTCGCCCGCCAGGCCGAGGAGCGTTTGCGGGCCGTG CAGATGTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CATTTGCCGCCTGGCCTGCCGCTGGAAACCTTGGACGTCGTTCTGGCCCACGCCTCGCGTACTTACCGCTCCGGCTTCCAGTCTGGGTGGTCCGCGTCGT AGCCCTGGGTGGGGTGAGGAGGCAGAGGATGGTCCTCTATCAGATTGGGGAAACGTAAGTCAGGGTCGGCCTCAAGCTTTTTGTAGATTGAATAATACGC TTCTTGCAACTTTTCGTCGGGGGCGTACCACATTGCACTTGCAGGAGGAGTCTCACTTCCGAAGACTCGTGATAGGAAAAAAGCCGCGCTCTTTCCCCCC TGAGAGACTGACGCCTGATAATAAACCAGTGCCTTTGGGAAATTGTGCTCCACTATCTTGTAATACGCTCCCAACTCATAATTAGCCGGCGCATAGCCCT GGCTAGCAGCACAGTGAGTATACGCCAACCCCAAATCCTTTTTTTTGGCCACATATATATAAAGCTTACCTAGTTCGGTTAGTGCCGGCGGATTTCCTAG
Amino Acid Sequence
>LysR family transcriptional regulator
MKLRHIEVFQAIRQAGSVSGAAQLLHVSQPAVSKVLQHAEQQLGFPLFLRVRGKLLATPEALELEREVAKLSDSLQAVRRLAQNLRRQPGHSLRIGATPA LALSLLPRAIGEWSARYPQSGCELATLHSRELVQGLLMRELDLALSLKQPEHPGLRGEAIASGVLVALAPREHWPEAERRQPLSLAGLAGEALIGLSTAD PLFARLEDYLSAVEPPPQVKIAVQTYALARALVEAGAGLALVDPFTALGADPHSTAIRPLSPAFPVTLYAITRADETPPHTLAPLLRMLARQAEERLRAV QM
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site