Pseudomonas aeruginosa isolate RN21, PARN21_RS19095
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGAACGCCTTGCACATGTCGACCACGGTGCCGTCGATCTCGACCATGGTGATCCGCTCGACGCTCTTGTGCTTGGCCACCTCGCGCAGCATGCCACCGTC GCCGCCGCCGATGATCAGCACGCGCCGGGCCGCGCCGTGGGCGAGGATCGGCACGTGGGTGAGCATCTCGTGGTAGATGAACTCGTCGGCCTCGGTGGTC TGGATCACTCCATCGAGCGCCATCACCCGGCCCATCCGGGCGTTTTCGAAAATCACCAGGTGCTGGTGCTCGGTGCGCACCTCATGCAGCATGTTGTCGA TGCTGAAGCGCTGGCCGTAGCCCTGGTACAGAGTTTCCTGATAATCGCTCATGGGCCGGGATCTCCCTGGTAAGGCTGCAATCTGGCAGCGGGACTTGCC CGCGCCGCGAAGAAAGGCGCGCATTCTACGCTGGCGGCAATGACAGGTCGAACCCCGCCGGCGGATGGCGCCGGCTGCGCCGGACAGGTATCGTCTGCCC
|
|
| DNA Sequence for Gene |
>PARN21_RS19095
ATGAGCCAGCCTACCTCTCCCCTCGTCCTGCACCTGCCCTACCAGTCACCCTGGGAATGGCGCCAGTTCCACCAGCATTTCGCCCTGCGCCTGCTCGCCG GTGTCGAAAGCCTGGGTGACGACCACTATGCCCGCAGCTTCCGGGCCAACGGTCGCCCGGCCTGGTTCGAGGTGCGACCGCTGGCGGAACGCCAGGTCCT GGCGCTGAGCCTCAGCCCGTCCGCCCATGCCCTGGCCGCCGAACTCGAGGCACGGGTCCGCCGGATGTTCGACCTGGACAGCGACCCGGCCGCCATCGCC CGGCATTTCGCCGGGGATCCCCTGCTCGGCCCGCTGGTGGCCGCCAATCCGGGACTGCGCCTGCCGGTGGCCTTCGATCCCTTCGAACAGGCGGTGCGCG CCATCGTCGGCCAGCAGGTCACGGTGAAGGCCGCGGTGACCATCACCGGGCGCCTGATCCAGCGCCTCGGCGAGCCGCTGGAAGATCTCGGCTACGACAG CATCAGCCACCTGTTCCCGACGCCCGCCGCGCTGGCGCAAGCCAACCTCGACGGCATCGGCATGCCCGGCAAGCGGGTACAGACGCTGCAACGCTTCGCC GCGGCGATCGCCTCGGGAGAGCTGAGCCTGGACCTGGCGGACGGCCCCGAGGCCCTGGTGGAGCGCCTCTGCGCGTTGCCCGGCATCGGCCCCTGGACCG CCGAATACATAGCCCTGCGTGCCATGGGCGAAGCCGACGCCTTCCCCGCCGCCGACCTCGGCCTGCTGAAATCCACGGTCTGGGGGCCGCAAGGCATCGA TGCGCGCAGCCTGAAGGCCCGCGCCGAGGCCTGGCGGCCTTGGCGCGCCTACGCCGCGATCCACCTGTGGAACCACTACGCCGCAGGCGGCTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CGCCGCGGCGGGAGGCTACAGCCTGACGTTGCCGCGCGGGCCGGCGATGGCCCAGATGATCAGGCCGAGCACCGGCAGGACGATGATCACCAGGACCCAG ATGATCTTCATCCCGGTTTCCGCAGCGCTTTTCAGGATGTTGACGATGGCCCAGATATCCAGGGCCAGGATGACCAGGCTGATCAGCCCGCTGAGGGTGG AACCCATGGCGCGATGCTCCCGAGCAAGAGTGTTCCCTCAGGATAGCCGGCGCGTTCACTCCACGAGGATGTCGGCGAAGCTGGCCACCGTCGGATGGCC GTCCAGGCTGCCGCCTTCGCGGGCCAGGCCGAGCGTGCGCATGCCCGCGTCGCGCGCGGCATCCAGTTCCTGCACCACGTCGGAAAGGAAAAGGATTTCC GCGGCCGGCAGGCCGATGGCCCCGGCGATCCGCGCATAGGAGGCGCTTTCCCGCTTCGGCCCGCTGGTAGTGTCGAAGTAGCCGGAAAACAGCGAGCCCA
|
|
| Amino Acid Sequence |
>DNA-3-methyladenine glycosidase
MSQPTSPLVLHLPYQSPWEWRQFHQHFALRLLAGVESLGDDHYARSFRANGRPAWFEVRPLAERQVLALSLSPSAHALAAELEARVRRMFDLDSDPAAIA RHFAGDPLLGPLVAANPGLRLPVAFDPFEQAVRAIVGQQVTVKAAVTITGRLIQRLGEPLEDLGYDSISHLFPTPAALAQANLDGIGMPGKRVQTLQRFA AAIASGELSLDLADGPEALVERLCALPGIGPWTAEYIALRAMGEADAFPAADLGLLKSTVWGPQGIDARSLKARAEAWRPWRAYAAIHLWNHYAAGG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|