Pseudomonas aeruginosa isolate RN21, PARN21_RS16975

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTCCTACGTCGGCGAGAACGCCCTGTTCGAGCAACAACTGCTCAGTGGCGAGCTGGAAGTCGAACTGACCCCGCAAGGCTCGCTGGCCGAGAAGATCCGC GCCGGCGGCGCCGGCATCCCGGCCTTCTTCACCGCCACCGGCTACGGCACCCCGGTCGCCGAGGGCAAGGAGGCGCGCGAGTTCAATGGCCGCCACTACA TCCTCGAACCGGCCATCACCGGCGACTTCGCCATCGTCAAGGGCTGGAAGGCCGACCATTTCGGCAACGTCGTCTATCGCCACACCGCGCAGAACTTCAA CCCGCTGGTCGCCACCGCCGGGCGCATCACGGTGGTCGAGGTGGAGGAGATCGTCGAGCCCGGCGAACTGGACCCGACGCAGATCCACACCCCCGGCATC TACGTCGACCGGATCATCCAGGGTCGCTTCGAGAAACGCATCGAGAAACGCACGCTGCGCGCCTGACGGCGGCCGCTACAACGACAAGAGGTTTCCCCAG
DNA Sequence for Gene
>PARN21_RS16975
ATGGCACTTACCCGCGAACAGATGGCGCAGCGCGTGGCGCGCGAATTGAAGGACGGCTACTACGTCAACCTCGGCATCGGCATCCCGACCCTGGTGGCCA ACTACGTGCCGGAAGGCATCGACGTCATGCTCCAGTCGGAGAACGGCCTGCTCGGCATGGGCGCGTTCCCCAGCGAGGCGGAAGTCGACGCCGACATGAT CAACGCCGGCAAGCAGACCGTGACCGCCCGCGTCGGCGCGTCGATCTTCGACTCGGCGCAGTCCTTCGCCATGATCCGTGGCGGCCACGTCGACCTCACC GTGCTCGGTGCCTTCGAGGTGGACGTGCGCGGCAACATCGCCTCCTGGATGATCCCCGGCAAGCTGGTCAAGGGCATGGGCGGCGCCATGGACCTGGTGG CCGGCGCCGAGAACATCATCGTCACCATGACCCACGCCTCCAAGGACGGCGAGTCCAAGCTGCTGCCGTACTGCACCCTGCCGCTGACCGGTTGCGGCTG CATTCGCAAGGTGCTCACCGACCTGGCCTACCTGGAGATCGAGGACGGCGCCTTCATCCTCCGCGAGCGCGCCCCCGGGGTCAGCGTCGAGGAGATCGTG GCGAAGACCGCCGGCAAGCTGATCGTCCCCGAGCACGTGCCGGAAATGAGTTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ATCGCGGCCCGCGCGGCCGGCGCCTCCACGCAAGGCGCCGGCCGCGCGGACCGTCCTTTCCAGAGGGCGTAGGATAGGAGCCTGTCGCACCGCCTACGTC CACCCGCAGCGATTCGGCCCGGCCACGGGCGAATCCAGGAGAACCATCCATGCAAGACGTCGTCATCGTCGCCGCTACCCGTACCGCCGTCGGCAGCTTC CAGGGCTCGCTGGCCGGCATTCCCGCCCCCGAGCTGGGCGCCGCGGTGATCCGCCGCCTGCTCGAACAGACCGGTCTCGATGCCGGCCAGGTCGACGAAG TGATTCTCGGCCAGGTGCTCACCGCCGGTTCCGGGCAGAACCCGGCGCGCCAGGCGGCGATCAAGGCCGGCCTGCCGGTCGGCGTGCCGGCCATGACCCT GAACAAGGTCTGCGGCTCCGGCCTCAAGGCCCTGCACCTGGGCGCCCAGGCGATCCGCTGCGGCGACGCCGAGGTGATCGTCGCCGGCGGCCAGGAGAAC
Amino Acid Sequence
>dehydrocarnitine CoA transferase subunit B
MALTREQMAQRVARELKDGYYVNLGIGIPTLVANYVPEGIDVMLQSENGLLGMGAFPSEAEVDADMINAGKQTVTARVGASIFDSAQSFAMIRGGHVDLT VLGAFEVDVRGNIASWMIPGKLVKGMGGAMDLVAGAENIIVTMTHASKDGESKLLPYCTLPLTGCGCIRKVLTDLAYLEIEDGAFILRERAPGVSVEEIV AKTAGKLIVPEHVPEMSF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site