Strain | Pseudomonas aeruginosa 2192 supercont1.1 genomic scaffold, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AGAGCGCCCCGACCAGCGCAGCGAAAGTATCCCGGTGCAGGTGGGCCTGGTCGGCGAGAACGGCTATCCACACGCCGGAAACGTGGACTTCGTGGACAAC CGTGTCGATGCGGCCACCGGCACCATCCGCGCACGCGCCACCCTGGTCAATCCCGACGGCCTGCTTACGCCGGGCCTCTATGCCCGAGTGCGCCTGCCGG GTAGCGGCAGTTTCGAGGCCATGCTGATCGACGACAAGGCCATCCTGACCGACCAGAGCCGCAAGTACGTGTATGTGATCGATGAGAACAACACCGCCCA GCGCCGCGACATCACGCTGGGACGCAAGGCCGAAGGCCTGCGCATCGTCGAGGAAGGTCTAAATCCCGGCGACCGCGTGATCGTCAACGGCATCCAGAAG GTTTCTGTCGGCATGCCAGTGACGGCCCAGGACATTGAAATGGCGCCTGCAGGCCGACAAAACGCCCAGGCGAGCGAATGAGCGCGGAGAGCCAGCCATC
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DNA Sequence for Gene |
>PA2G_02333
ATGAACTTTGCCCGCTTTTTCGTGGACAGGCCGATTTTTGCGGCCGTGCTGTCCATCATCATTTTCGTGGTTGGGTTGATCGCGATCCCGCTCTTGCCCG TCAGCGAGTACCCGGAAGTCGTGCCACCCACCGTACAGGTTCGCGCCACGTATCCTGGCGCAAATCCGCGCGAAATCGCCGACACGGTAGCCGCACCACT GGAGGCATCCATCACCGGCGTGGAAAACATGCTCTACATGAAGTCCGTGGCCGGTAGTGATGGCGTGTTGGTGCTGACCGTCACCTTCCGTCCTGGCACC GATCCCGACGACGCCCAGGTCAAGGTACAGAACCGTGTCGCCCAGGCAGAGCCGCGTCTTCCCGAAGCGGTGCGCCAGCAAGGTGTGGTGACCGTCAAAC AGTTCCCCAACGAAACGCTGGTCGTGCAGTTGCGCTCGCCGGGCGATCGCTATGACGCGCTGTACCTGCGCAACTATGCCGTGCTCCATGTACGCGACGA GTTGGCACGCATCCAGGGGGTGGGCGATGCCACGATCAACGGCTCTGGCGACTACGCCATGCGCTTATGGCTGGACCCCGACAAAATTGCGGCGCTGGGT ATGACCGCCGGCGATGTGGTCGAAGCCGTGCGCGAACAGAACGTCCAGGTCTCGGCCGGTCAACTAGGTGCGCCGCCCAACCCCTCGGGAAGCGACTTCC TCCTGTCCATCAATGCGCAGGGCCGGCTGGTGACGGAAGAAGAGTTCGGCGACGTCATCGTCAAGACCGGATCGCAGGGTCAGGTCACCCGGCTGCGAGA TGTGGCGCGCGTGGAAATGGACGCATCCAGCTACTCGCTGATGTCGTTGCTCAACAACAAGCCTGCTGTCGCGATCTCTGTCTTTGAAGCCCCGGGCGCC AATGCCATCGAAATCTCGGATCAAGTCCGCGCGAAGATGGACGAGTTGGCCAAGCGCTTTCCCGAGGGAGTGGAATGGTCGGTGGAGTATGACTCAACTG TCTTCGTGCGTCAGTCGATCAAGGCGGTCGTCAACACTCTGCTGGAAGCCATCGGACTGGTGGTGCTGGTGGTGATCTTGTTCCTTCAGACTTGGCGTGC CTCCATCATCCCACTGCTAGCCGTGCCGGTGTCGGTGGTAGGCACCTTCGCCGTGCTGCTGATGCTGGGCTTTTCCATCAATACGCTCACGCTTTTTGGA CTCGTGCTTGCCATCGGGATCGTGGTGGACGACGCGATCGTGGTGGTGGAAAACGTCGAGCGCAACATCGCCGAAGGGCTGGCGCCGCTGGCTGCGGCCC ATCAGGCCATGCGCGAAGTCAGTGGCCCCATCGTCGCCATCTCGCTGGTGCTGTGCTCGGTATTCGTGCCTATGGCATTCCTGTCCGGCGTGACAGGGCA GTTCTACAAACAGTTCGCCGTCACCATTGCGATCTCCACGGTAATTTCGGCCATCAACTCGCTGACGCTGTCGCCTGCGCTGGCCGCGCGCCTGCTTCGC CCGCATGGTGCCGCGCCAGACCTGCCCACGCGGGTGCTGGATCGCAGTCTGGGCTGGATATTCCGGCCGTTCAACCGTTTCTTCCTGCGCAGCGCGGATG GCTATGGAAACAGCGTGTCGCGCATCCTCGGGCGGCGTGGTGCGGTGTTTCTCGTCTACATCGCGCTACTGGTGGCGACGGGAGCTGTGTTCAAGGCCGT CCCTGGCGGATTCATCCCCATGCAGGACAAGCTGTATCTCCTCGGTGTCATCCAGCTACCCGAGGGTGCATCCCTGGAGCGCACGGAAGCGCTGGTCCGC CGTGTGAGCGACATCGCGCTCAAGACCGATGGCGTCTACAACGCCGTGCAGTTCCCGGGCATGAACGGCTTGCAGTTGACCAACACGTCCAATAGCGGCC TAGTGTATTTCATACTCAAGCCCATCAATGAGCGCAAGCACACTGCAACCGAGATTGCGGAACAGTTGAACGAGCGCTTCGCTCAGGAGCAGGACGGTCT GGCCTTTGCCATCATGCCGCCCCCTGTCATGGGGCTGGGCGCGGGTTCCGGGTTCTCTCTTTACGTGCAGGATCGCAACCGTGAGGGCTATGCCGCATTG CAGACGGCGACCACCGAGCTGGCGACGGCCATCTCGCAAGAACCGGGATTCCAATATCCGATCAGTTCCTATCAGGCCAATGTGCCGCAGCTTGACGCCG TAGTGGACCGCACCAAGGCGAAGGCACAGGGCGTGGCCGTGACCGATCTTTTCGATACGCTGCAAGTGTACCTGGGTTCGGCGTATGTCAACGACTTCAC GCGCTTTGGCCGCACCTTCCGGGTGATGGCTCAGGCGGACGCACCGTTCCGCAGTTCTGTCGAGGACGTGGTCAAACTGCGCACCCGCAACGCCAATGGC GACATGGTGCCCATCGGCAGCATGGTGGACGTGCGCAAGACATTCGGCCCCGATCCCGTCATCCGCTTCAACGGCTATCCATCTGCCGACCTGATTGGTG AGTCAGATCCGCGTCTGGTGTCGTCATCGCAGGCATTGCAGCAAGTGCAATCCATTGCAGACAAGGTGCTGCCGCCAGGCATGCAACTGGAGTGGACCGA CCTCAGCTACCAGCAGGTCACGCAAAGCAATACCGCGCTGGTGGTGTTCCCGCTGGCGGTACTGTTGGTCTTCCTGGTGCTGGCGGCACTGTACGAAAGC TGGACGTTGCCGCTGGCCGTCATCCTGATCGTGCCCATGAGCCTGTTGTCGGCCATGACGGGCGTGTGGCTCGCGGGTGGTGACAGCAACATTTTCGTGC AGATTGGCTTGATAGTGCTGATTGGTCTGGCCTCCAAGAATGCCATTCTGATCGTGGAGTTCGCCCGTGAACTTGAGCGCAAGGGGCACAGCATCCTCGA TGCCGCGCTGGAGGCATCACGCCTTCGTCTGCGCCCGATCATCATGACTTCCATCGCCTTCATCGCTGGCGTGGTGCCGCTGATGGTCGGTTCCGGCGCA GGCGCGGAGATTCGCCAGGTTATGGGAGTGACTGTGTTCGCCGGCATGCTCGGCGTGACCTTGTTCGGTTTATTCCTGACTCCTGTTTTCTACGTCGCGT TACGCAGGCTCGCGACGCGCAAGCCACGTCGCCAGGCAAATGTCGCCATGGAGGCCACCCATGACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CTCCACAAGGACTGATTCCGTCATGCTTCAAACGCCATCCCGCATCCGACCATGCCTACGTCGGATGCCACATCTGGTACTGCTCCCTTTGGTGGCGTTG ACGCTGGCAGCTTGCGCAGTAGGGCCGAATTACAAGGCACCTGCCGCGCCCCAGGCAGTGACGTATGCCCGCCAAGACCCCGTTGCCGTGTCCCAGCTTG TACCGGAGGCCGATGCGCAATTCTGGCGGGAACTGGATGACCCGGTGCTGCACTCTTTGGTGGAGAATGCTCTTCACGCCAATCACGACATCCGCATAGC ACTGTCGCGCTACGAGCAAGCCAGCGCACTGTCGCGCGAACGTCGCCAAGACTACTATCCGACGCTGGGCGCGTCCGGTGAAATCAGTACCCAGCGCGCC AGTGCTGCACAAGCACCGGATGCGTCCCGCTCCGACCGGGATAACGATCTGCATTCGGCTGGCCTATCCGTGATCTGGGAATTGGACTTCTTTGGCCGAG
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Amino Acid Sequence |
>transporter
MNFARFFVDRPIFAAVLSIIIFVVGLIAIPLLPVSEYPEVVPPTVQVRATYPGANPREIADTVAAPLEASITGVENMLYMKSVAGSDGVLVLTVTFRPGT DPDDAQVKVQNRVAQAEPRLPEAVRQQGVVTVKQFPNETLVVQLRSPGDRYDALYLRNYAVLHVRDELARIQGVGDATINGSGDYAMRLWLDPDKIAALG MTAGDVVEAVREQNVQVSAGQLGAPPNPSGSDFLLSINAQGRLVTEEEFGDVIVKTGSQGQVTRLRDVARVEMDASSYSLMSLLNNKPAVAISVFEAPGA NAIEISDQVRAKMDELAKRFPEGVEWSVEYDSTVFVRQSIKAVVNTLLEAIGLVVLVVILFLQTWRASIIPLLAVPVSVVGTFAVLLMLGFSINTLTLFG LVLAIGIVVDDAIVVVENVERNIAEGLAPLAAAHQAMREVSGPIVAISLVLCSVFVPMAFLSGVTGQFYKQFAVTIAISTVISAINSLTLSPALAARLLR PHGAAPDLPTRVLDRSLGWIFRPFNRFFLRSADGYGNSVSRILGRRGAVFLVYIALLVATGAVFKAVPGGFIPMQDKLYLLGVIQLPEGASLERTEALVR RVSDIALKTDGVYNAVQFPGMNGLQLTNTSNSGLVYFILKPINERKHTATEIAEQLNERFAQEQDGLAFAIMPPPVMGLGAGSGFSLYVQDRNREGYAAL QTATTELATAISQEPGFQYPISSYQANVPQLDAVVDRTKAKAQGVAVTDLFDTLQVYLGSAYVNDFTRFGRTFRVMAQADAPFRSSVEDVVKLRTRNANG DMVPIGSMVDVRKTFGPDPVIRFNGYPSADLIGESDPRLVSSSQALQQVQSIADKVLPPGMQLEWTDLSYQQVTQSNTALVVFPLAVLLVFLVLAALYES WTLPLAVILIVPMSLLSAMTGVWLAGGDSNIFVQIGLIVLIGLASKNAILIVEFARELERKGHSILDAALEASRLRLRPIIMTSIAFIAGVVPLMVGSGA GAEIRQVMGVTVFAGMLGVTLFGLFLTPVFYVALRRLATRKPRRQANVAMEATHD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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