Pseudomonas aeruginosa UM-01, AAY82_RS16775
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain UM-01, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCAGGCGAAGATCGAGCTGCCGCACGATGCGGCCTTCTTCATCGCCCAGCGCATCCGTTCCAACGTGCGCGAACTGGAAGGTGCGCTGAAGCGGGTGATC GCCCACTCGCACTTCATGGGCCGGCCGATCACCATCGAGCTGATTCGCGAGTCGCTGAAGGACCTGTTGGCCCTTCAGGACAAGCTGGTCAGCATCGACA ACATCCAGCGCACCGTCGCCGAGTACTACAAGATCAAGATATCCGATCTGTTGTCCAAGCGGCGTTCGCGCTCGGTGGCGCGCCCGCGCCAGGTGGCCAT GGCGCTCTCCAAGGAGCTGACCAACCACAGCCTGCCGGAGATCGGCGTGGCCTTCGGCGGTCGGGATCACACCACGGTGTTGCACGCCTGTCGTAAGATC GCTCAACTTAGGGAATCCGACGCGGATATCCGCGAGGACTACAAGAACCTGCTGCGTACCCTGACAACCTGACGCAGCCCACGAGGCAAGGGACTAGACC
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| DNA Sequence for Gene |
>AAY82_RS16775
ATGCATTTCACCATTCAACGCGAAGCCCTGTTGAAACCGCTGCAACTGGTCGCCGGCGTCGTGGAACGCCGCCAGACATTGCCGGTTCTCTCCAACGTCC TGCTGGTGGTCGAAGGCCAGCAACTGTCGCTGACCGGCACCGACCTCGAAGTCGAGCTGGTTGGTCGCGTGGTACTGGAAGATGCCGCCGAACCCGGCGA GATCACCGTACCGGCGCGCAAGCTGATGGACATCTGCAAGAGCCTGCCGAACGACGTGCTGATCGACATCCGTGTCGAAGAGCAGAAACTTCTGGTGAAG GCCGGGCGTAGCCGCTTCACCCTGTCCACCCTGCCGGCCAACGACTTCCCCACCGTAGAGGAAGGTCCCGGCTCGCTGAACTTCAGCATTGCCCAGAGCA AGCTGCGTCGCCTGATCGACCGCACCAGCTTCGCCATGGCCCAGCAGGACGTGCGTTACTACCTCAACGGCATGCTGCTGGAAGTGAACGGCGGTACCCT GCGTTCCGTCGCCACCGACGGCCACCGACTGGCCATGTGCTCGCTGGATGCGCAGATCCCGTCGCAGGACCGCCACCAGGTGATCGTGCCGCGCAAAGGC ATCCTCGAACTGGCTCGTCTGCTCACCGAGCAGGACGGCGAAGTCGGTATCGTCCTGGGCCAGCACCATATCCGTGCCACCACTGGCGAATTCACCTTCA CTTCGAAGCTGGTGGACGGCAAGTTCCCGGACTACGAACGCGTACTGCCGCGCGGTGGCGACAAGCTGGTGGTCGGTGACCGCCAGCAACTGCGCGAAGC CTTCAGCCGTACCGCGATCCTCTCCAACGAGAAGTACCGCGGCATTCGCCTGCAGCTTTCCAACGGTTTGCTGAAAATCCAGGCGAACAACCCGGAGCAG GAAGAGGCCGAGGAAGAAGTGCAGGTCGAGTACAACGGCGGCAACCTGGAGATCGGCTTCAACGTCAGTTACCTGCTCGACGTGCTGGGTGTGATCGGTA CCGAGCAGGTCCGCTTCATCCTTTCCGATTCCAACAGCAGCGCCCTGGTCCACGAGGCCGACAATGACGATTCTGCCTATGTCGTCATGCCGATGCGCCT CTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCACACTGAATGTCCCTGACCCGCGTTTCGGTCACCGCGGTGCGCAACCTGCACCCGGTGACCCTCTCCCCCTCTCCCCGCATCAACATCCTCTACGGCG ATAATGGCAGCGGCAAGACCAGCGTGCTCGAAGCCATCCACCTGCTAGGCCTGGCGCGTTCATTCCGCAGTGCGCGCTTGCAGCCGGTGATCCAGTATGA GGAAGCGGCCTGCACCGTATTCGGCCAGGTGATGTTGGCCAACGGCATTGCCAGCAACCTGGGGATTTCCCGTGAGCGCCAGGGCGAGTTCACCATTCGC ATCGATGGGCAGAACGCCCGAAGTGCGGCTCAATTAGCGGAAACTCTTCCACTGCAACTGATCAACCCGGACAGCTTTCGGTTGCTCGAGGGAGCGCCGA AGATCCGCCGACAGTTCCTCGATTGGGGAGTGTTCCACGTGGAACCTCGGTTTCTGCCCGTCTGGCAGCGCCTGCAGAAGGCGCTGCGCCAGCGGAACTC
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| Amino Acid Sequence |
>DNA polymerase III subunit beta
MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVEGQQLSLTGTDLEVELVGRVVLEDAAEPGEITVPARKLMDICKSLPNDVLIDIRVEEQKLLVK AGRSRFTLSTLPANDFPTVEEGPGSLNFSIAQSKLRRLIDRTSFAMAQQDVRYYLNGMLLEVNGGTLRSVATDGHRLAMCSLDAQIPSQDRHQVIVPRKG ILELARLLTEQDGEVGIVLGQHHIRATTGEFTFTSKLVDGKFPDYERVLPRGGDKLVVGDRQQLREAFSRTAILSNEKYRGIRLQLSNGLLKIQANNPEQ EEAEEEVQVEYNGGNLEIGFNVSYLLDVLGVIGTEQVRFILSDSNSSALVHEADNDDSAYVVMPMRL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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