Pseudomonas aeruginosa UM-01, AAY82_RS13115

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain UM-01, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTCTGAGCGGCGGCGGAAAAAGCTTGCTGCGCAAGGAGAAGCGCCTGCGGGTGAACATGGAAATTGCCCGGGAAAAGTCGACGGTAATTATTCGTTGAAT AACAGGGAAGTGCATACTTCCAACTTGGAAGTTAACTGCATGGCACCATCCATGCATTACACGGATGACGGTTTTTATTATAAGTCCAAACTGGCGAAGA CAAGCAAGAGAGGCCGGGATGCCAGAGTTCTATAGTCGGAAATACAAGCGTTGCAATGTCGACGGATAGCGCGAAGAGGCGGCGGTACCCTGCGAAACGA GGCAATTCCCCGAATGGCGGGCACTCGAACGGATTTATAAGTCCGCCGTTCGGCGTTCACCTCGATGCCTGTGCACGGGATACTTATATCGGTGGTTCGC ACCACTGATTATCGATTTGAACTCGTTCGAGTCTTTACCGCGTTCCCGGCCGAAATAAAAGGCGGGTGGACGATTATTGCCTCACACAAGGAACATAGGC
DNA Sequence for Gene
>AAY82_RS13115
ATGACCAGAACTTCGAACCCATGCGCAGTGGTATTGGCCTTTGCGGCAATTGCCGCTTCGGGAACCGCGATGGCGGCAAACACTATCACATTCAGCGGCG AAGTGACCGACCAGACCTGCCAGGTCGCGGTCAACGGCTTCACCGACCCCACGGTGATCCTCGACAGCGTACCGGTGAGCGCCCTCGATGGCGCAGTGGG CCGCAGCGCCGGCGAAACCGCCTTCACCCTGCAACTCACCGATTGCGTCGCGCCGACGGCCGACGAGCATTTCACCACCCTGTTCCAGGCCACCAACCCC AGCGCCGCCGGGAACCTGGTGAACACCGCCGCCAGCGGCGCGACGGGCGTGGCGCTGCAATTGCTCGATAGCGTCGGCGGCAACCCGGTCGACCTGGCCG GCGGCGCGGCGGTGCCAGCCGGCGATATCGTGCTCGCCAACGGAGCCACCAGCACCAGCTACGACTACGCGGTGCAGTACGTCTCCGAAGCGGCGACCGT GACGCCCGGTCCGGTACTCGGCGCCGTGACCTACACGCTGCGTTACGAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ATGCCGGCGGCGCATGCGCCGCCCCTTCCTTTTCCCAGCACTAAAGCCGGGCCCGGTCGCTGGACCGTGCCCGGCCAGGTAAGCCGCATGCCCAGACATT CGTACCGATCCGGCAGGACATCGGCGCTTCTGCTCGTCCTGCTGGCGAGCATCGCCCAGGCGCGGGCAAGCGTGGTGGTGACCGGGACCCGGGTGATCTA TCCCGGCGAGGCACGGGAGAAGACCGTGCAACTGAGCAATCGCGATGCGTTTCCCAACGTCGTCCAGGCCTGGGTCGACATCGACGCCCCGGACGCGCCG CCGGACCAGGCGGACGCGCCGTTCCTGGTCAACCCGGCGGTATTCCGCATGGCCCCGGACAGCGGCCAGACGCTGCGCATCGTCTACACCGGGCAGGGCC TGCCGGGCGATCGCGAATCGCTGTTCCATCTCAACGTCCTGCAGATCCCGCCACGCAACAGCAGCCATGCGGATCGGAACCAGATGCTGCTGATGCTGCG
Amino Acid Sequence
>fimbrial protein
MTRTSNPCAVVLAFAAIAASGTAMAANTITFSGEVTDQTCQVAVNGFTDPTVILDSVPVSALDGAVGRSAGETAFTLQLTDCVAPTADEHFTTLFQATNP SAAGNLVNTAASGATGVALQLLDSVGGNPVDLAGGAAVPAGDIVLANGATSTSYDYAVQYVSEAATVTPGPVLGAVTYTLRYE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site