Pseudomonas aeruginosa S04 90, YH69_RS27145
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain S04 90 genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGCCCAGGGCTGGGCCTGGGGCATCGCTCTGCCCGTCAGCTACCTGCTGTTTTTCAAGCGCGCAACCTCATAAAAAATACCCCGGCCCCGCGCCGAGTAT TTCTTGCGGAATGGAATCAGGGCGATCGGCAAGCTGATCGCACCCTGATCTGCAAGAGATTCGCCGTGAACACTCCACATCAATCCCTTCGCCGAAGCTG CCTGGCCGTCTTGGCCTGCAGTGCGCTGGTCGCACAGGGAGCTTTCGCAGCGAGCGCCTCCGAGCAGGCGAACCTGGAGGTGATGATCCGGCAGCTCAAC GCCCTCGAGGACACCGCCCACCGCAGTGCCCAGGGTGCCGATGAGCCCGGACAGCGCTTCTACTTCGACTACTCGCGCCTGGCCGCTGATCTGCAGCGCA TCCGCCAAGGCCTGCAGGACTACATGACGCCCAGCCGCGCCCAACCGCGTGACCCTTCCGACCTATCTGGGGATTACACCCTGCGCGGAGGGCCGATGCC
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| DNA Sequence for Gene |
>YH69_RS27145
GTGAGCATGAGTGGAGCCCAAACATCAGCGTTCCAGGCCGCCGCTGGCTTTCCCCCATCGGCCGGCGAGGGGCTGTTCATTGGAGCAGCGATGACCTTCC TTCTGCTGTGGTCCGCCTGGGCGATGTACAGCACCTGGCGCGGCTGGGCCACCAACAACCTCGACAGCGCCACTGCCGGCGTTTCCGCGATACGGATCGT GGTCCTCCTCAGCATCACCTCTTTCTTCCTCCTCAGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCATACGGAGACACTCATGCTGAAATTCACCCTCCAGAAACTGTCCACCCTCTGCCTGCGCCTGGCTGCCATCTCTTTGGTACTCCCAGGCGTCGCCTT GGCTGCACTCCCCAAGCCCGAGGCGCCTAGCCGCGGGGAAGGATCGGGGATCATGCAAACCATCCAGAACTTCGGCTATGACGGAGCGATGCTCCTCGCG CTACTCATCTGCGTGGCTGTCTTTCTGGGAGTCTCCTGGCATACCTACGGCACCTATCACGCCATCCATGATGGGAAAAAGAAGTGGTCGGATCTCGGAG CGGGCGTGGCCGTAGGCATCGGCCTGCTGATCTTGATCATTTATCTCGTCACCAAAGCCACCACCATCATGTAAGGGCCTTCCCATGCCCGAAGAACATC TGTTTCAGGATGGGACCCTCAGCTTCCTGCCGACCCGTTTGAACCGGCAACCGGTGGTCATCGGCGGTCTGACTGCGGACGAAATGTGGATCACGGTCCT
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| Amino Acid Sequence |
>integrating conjugative element protein
MSMSGAQTSAFQAAAGFPPSAGEGLFIGAAMTFLLLWSAWAMYSTWRGWATNNLDSATAGVSAIRIVVLLSITSFFLLS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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