Pseudomonas aeruginosa S04 90, YH69_RS13125
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain S04 90 genome. [Details] | |
| DNA Sequence Upstream of Gene |
CTGTTTCCGCCGGCTGGCGATTTCGTCCTGCGTGACAGCGACAAGCCGCTGGTGCTGATCACCGCCGGCGTCGGCATCACCCCGGCCCTGGCCATGTTGC AGGAAGCGCTGCCGCAGGCGCGGCCGATCCGCTTCATCCATTGCGCCCGGCATGGCGGCGTGCATGCCTTCCGCGACTGGATCGAAGACGTGTCGGCGCA GCACGAGCAGGTCGAGCACTTCTTCTGCTATAGCGAACCGCGCGCCGGCGACAGTCCCGACGCCGAGGGATTGCTGAGCCGCGAGAAACTGGCCGACTGG TTGCCGCAGGAGCGCGACCTGGACGCCTACTTCCTCGGACCCCGGCCTTTCATGGCGCAGGTCAAGCGCCACCTGGCCGACCTCGGCGTACCCTCGCAGC AATGCCACTACGAGTTCTTCGGTCCGGCCGCCGCGCTGGACGCCTGAAGCGACGGGCCGGCGCGAGGTGCGTCGGCCCTTTTCGGAAAAAGGAGATCGAG
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| DNA Sequence for Gene |
>YH69_RS13125
ATGAACGCTCTGTTCGATTGTCCACGGCGGGTGCTGCGGATCGGTCACGGGCTGCTGGCGGCCGGCCTGGCGCTGCTCGTCGCCGGCGTGATCGCCGCCT ATTTCCTCGACCGCTACCTGAACATGCCGGCGCTGGTGTTTTCCCATGCGCTGGTGATCCTCGGCCCGACCCTGTTGAAGATTGGCTACGTGATGCGCCT GAGCGCGCTGTTCCGCATGCGTCGACCCGGTTGGGAGGTCTGCTGTGCAAGTGCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCGTTCCAGGCTGATGGCCATACCGCCGATCTGGCGCCTGGGCTTCCGCCCGTTCTTCCTCGGCGGCGCGCTGTTCGCGGTGCTCGCCATCGCGCTCTGG CTGGCGGCGCTGGCCGGGCTCTGGAGCGGCTGGCAACCGGTCGGAGGCTGGCTGGTCTGGCATCGTCACGAAATGCTCTTCGGTTTCGGTGTGGCGATCA TCGCCGGCTTCCTGTTGACCGCCGTGCAGACCTGGACCGGCGTACCCGGCCTGCAGGGCAAACCCCTGGCCCTGCTCGCCGGGCTCTGGCTGGCGGCGCG CCTGGCCTGGCTATTCGATGCGCCGCTGGCGCTGCTGCTGGTGCTGCAACTGAGCTTCCTGCCGCTATTGGCCTGGGCTATCGGTCGCAGCCTGTGGCGG GTGCGGCAGAAGCGCAATTACCCGGTGGTGGGCCTGTTGCTGCTGTTGAGCCTGGCCGACGCCCTGGTCCTGCTCGGCCTGTTCGAGGGCAACGACGACT
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| Amino Acid Sequence |
>psl and pyoverdine operon regulator PpyR
MNALFDCPRRVLRIGHGLLAAGLALLVAGVIAAYFLDRYLNMPALVFSHALVILGPTLLKIGYVMRLSALFRMRRPGWEVCCASA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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