Strain | Pseudomonas aeruginosa MRSN 321 contig8, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCCGTCCACCAGCACCAGGGTGTGCTCGCTGGACATGCCGCGAACGCTGATGCCCCGCCGGGACATGCCGACGCCGTTGAACTGCAGGCTTTCCGAACCG CGCAGGGCTTCCTGCAGGTCGCGCACCGGGCGCCGCCGCAGGTCCTCGGCGGCGATCAGCGAAACGCTGGCCGGGGCGTCGCGCAGCTTGCGCTCGGTAG TGGTGGCGCTGACCACGGTCGGCTCCAGGTCGACCGGCGCGGCCAGCGCCAGGCAGGGAAGCAGGTAGAGGAACGGCACGGCGCGGGCCAGCCGCAGCGG AGGAAGACGGTGCGGGGAGGAATGGGGGGTCATGGTCGGCAGGTATGAATTATGAATATTTATAAGTTATAACATAACATTTTCTCGAATGAAGAATGCC CGCCGTTTCTTCTTCGTCGAGGCGAGGGAACGTCTCGCTCGCCGTATCCCTCGAAGCACAGGACCCCACTCTCAACCGGGCATGCCCCCCAGGAGGAAAG
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DNA Sequence for Gene |
>T649_RS14405
ATGACCGCAACCGAGCAGATCATGGCGCTCCTGGAACGCTGGGACCGCCAGCAGGAGGGCTACATCCGCCAGCGCGAGGAGCGCTACGAGGCGATGTTCC AGTTGCTCGAAGACCTCTTCGGCCGCGACGGGCGCTTCACCGCCATCGACGCCGCCTGCGGCCCGGGGTCCCTCGGCCGGCGCCTGCTCGAACGCTTCCC GGCGGCGCGGGTGGTGGCGCTGGACGCCGACGTCATGCTGCTGGAGATCGCGCGTACGGCGCTGGCCGGTTTCGCCGAACGGGTCCGCGTGGTGGAGTGC GACCTCACCGATCCAGGCTGGACCGAACGGGTCGCCGAAGCGCGCGAGTCCCTCGCCGGCGAACGGCCCGCGGCGCTGCTCTCTTCCACCGCGTTGCACT GGCTGTCGCCCGCCGAACTCGCCGGGTTCTACGCCCAGGCCGGCGAGCTGCTCGCCCCCGGCGGCGTGCTGCTGAACGCCGACCACATGCGCTACGACCG ACGCTGGCCGGGACTCGCGGAATTGTCCCGGAAGCACCGCGAGCGGGTCCTCCAGGCGTCCGTGGCCAGCGGCGCGGACAGTTGGGAAGACTGGTGGCAA CGCGCCGCGCAGATCCCCCGGCTGGCCCCGCTGAAGGCGCAGCGCGACGCCCATTTCGCGCGGCGCCCGCTCAGGCGCGCCAGCGAAGACGAAGACTGCT CGCTCGATTTCCATCTCGCCGCCCTGCGCCAGGCGGGTTTCGCCGAGGCCGCCACGGTCTGGCAGCAGTTGGACAACTACGTCGTCTTCGCCCGCCTCGC CCAGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TACGCCGTCACCCGGGCACGGGGAATACCTCCAATGGAACCCGGGCAATCCGCCGGACGTTGACGCAGATCAACGCCGGCTCGGCGTCGCTCGCCAGAAT CCACAACATCTTGTTGTTTTTTCAAAATCAAAACACATCATGTTGTGGAGAAGTTGAAATGACCCAGCCCCGGAAGGCTACCTGGCCGGCCACCCTGCTC AAGCGCAACGGACGTGAAGTCCCTTTCGATCCCGGCAAGATCGAACGCGCCATCGCCGCCGCCGGCCAAGCCACCGGCGAGTTCGACCCGCAGCAGGCGC AGGCGCTCGCCGAACGCGTGGTGGAACGCCTGCCGGAACGCGCCTGCCTGGATATCGAACGGGTCCAGGACCTGGTCGAACGGGTGCTGATGGAGGCCGG CCACTACCCCACGGCGCGCGCCTACGTGGTCTACCGCGAACGCCACGGCCGGCTGCGCCGCGAGCGCAAGACCCTGGTGGACGTCGCCGCGTCGATGAAC
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Amino Acid Sequence |
>hypothetical protein
MTATEQIMALLERWDRQQEGYIRQREERYEAMFQLLEDLFGRDGRFTAIDAACGPGSLGRRLLERFPAARVVALDADVMLLEIARTALAGFAERVRVVEC DLTDPGWTERVAEARESLAGERPAALLSSTALHWLSPAELAGFYAQAGELLAPGGVLLNADHMRYDRRWPGLAELSRKHRERVLQASVASGADSWEDWWQ RAAQIPRLAPLKAQRDAHFARRPLRRASEDEDCSLDFHLAALRQAGFAEAATVWQQLDNYVVFARLAQA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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