Pseudomonas aeruginosa MRSN 321, T649_RS20255
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa MRSN 321 contig10, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGGCCTGCGAAGTGTCCTATAAGGACCGTGGCGGCAAATACCAGGGCCAGCGCGGCGTGACCCTGCCAAAAGCCTGACGCCAGAGCGTTTCGACACCGGA AACCGGGCCTGGCGCCCGGTTTTTTCATGCCTTTTCCGCCAACCCCTCGCTGTTCCCCGCCGGCCGCTCTGGCACGCCTTATCGCGGGCGGGCAGGGGCT TATGCGCAGGCGGCCGCCCGTCCTGTGAAATCTGGCAGTTACCGTTAGCTTTCGAATTGGCTAAAAAGTGTTCATCGGCTACGCGTGAACACGGACGCCA ATCGTTTGCGCAGGCCGATCTGCAAGACCCACACAAGCCCCTCGCCTGAAGGGGTACGCATCCGCCGTGGCTGGTCCGCGCGGATGGCCGCTGAGTTACT TGTCTGCCGTTCGAACAATAAGAACGAACTCTACGTAATGCCGGGATACCCGTGGCAGCGATAGCTGTTTGCCTGTTCGAAAATTTTTGGGAGGTGTGAA
|
|
| DNA Sequence for Gene |
>T649_RS20255
ATGCGGCGCGAAAGTCTGTTGGTATCGGTTTGCAAGGGCCTGCGGGTACATGTCGAGCGCGTTGGGCAGGATCCCGGGCGCAGCACGGTGATGCTGGTCA ACGGCGCGATGGCGACCACCGCCTCGTTCGCCCGGACCTGCAAGTGCCTGGCCGAACATTTCAACGTGGTGCTGTTCGACCTGCCCTTCGCCGGGCAGTC GCGTCAGCACAACCCGCAGCGCGGGTTGATCACCAAGGACGACGAGGTGGAAATCCTCCTGGCGCTGATCGAGCGCTTCGAGGTCAATCACCTGGTCTCC GCGTCGTGGGGCGGTATCTCCACGCTGCTGGCGCTGTCGCGCAATCCGCGCGGCATCCGCAGCTCGGTGGTGATGGCATTCGCCCCTGGACTGAACCAGG CGATGCTCGACTACGTCGGGCGGGCGCAGGCGCTGATCGAGCTGGACGACAAGTCGGCGATCGGCCATCTGCTCAACGAGACCGTCGGCAAATACCTGCC GCCGCGCCTGAAAGCCAGCAACCATCAGCACATGGCTTCGCTGGCCACCGGCGAATACGAGCAGGCGCGCTTTCACATCGACCAGGTGCTGGCGCTCAAC GATCGGGGCTACCTGGCTTGCCTGGAGCGGATCCAGAGCCACGTGCATTTCATCAACGGCAGCTGGGACGAATACACCACCGCCGAGGACGCCCGCCAGT TCCGCGACTACCTGCCGCACTGCAGTTTCTCGCGGGTGGAGGGCACCGGGCATTTCCTCGACCTGGAGTCCAAGCTGGCCGCGGTACGCGTGCACCGCGC CCTGCTCGAGCACCTGCTGAAGCAACCGGAGCCGCAGCGGGCGGAACGCGCGGCGGGATTCCACGAGATGGCCATCGGCTACGCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
ACCCTTGACCTGCGAAGACCCGGCCTGGCCGGGCTTTGCGGTTGCATAACGCACGGAGTAGCCCCATGCACGCCATCCTCATCGCCATCGGCTCGGCCGG CGACGTATTTCCCTTCATCGGCTTGGCCCGGACCCTGAAATTGCGCGGGCACCGCGTGAGCCTCTGCACCATCCCGGTGTTTCGCGACGCGGTGGAGCAG CACGGCATCGCGTTCGTCCCGCTGAGCGACGAACTGACCTACCGCCGGACCATGGGCGATCCGCGCCTGTGGGACCCCAAGACGTCCTTCGGCGTGCTCT GGCAAGCCATCGCCGGGATGATCGAGCCGGTCTACGAGTACGTCTCGGCGCAGCGCCATGACGACATCGTGGTGGTCGGCTCGCTCTGGGCGCTGGGCGC ACGCATCGCTCACGAGAAGTACGGGATTCCCTACCTGTCCGCGCAGGTCTCGCCATCGACCTTGTTGTCGGCGCACCTGCCGCCGGTACACCCCAAGTTC
|
|
| Amino Acid Sequence |
>rhamnosyltransferase
MRRESLLVSVCKGLRVHVERVGQDPGRSTVMLVNGAMATTASFARTCKCLAEHFNVVLFDLPFAGQSRQHNPQRGLITKDDEVEILLALIERFEVNHLVS ASWGGISTLLALSRNPRGIRSSVVMAFAPGLNQAMLDYVGRAQALIELDDKSAIGHLLNETVGKYLPPRLKASNHQHMASLATGEYEQARFHIDQVLALN DRGYLACLERIQSHVHFINGSWDEYTTAEDARQFRDYLPHCSFSRVEGTGHFLDLESKLAAVRVHRALLEHLLKQPEPQRAERAAGFHEMAIGYA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|