Pseudomonas aeruginosa MRSN 317, T648_RS08980
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa MRSN 317 contig8, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGCGCCGGCGAGAGTCTCGAAGACGGACTGCTGGACCTGCGCCTGGGCGCCGACGGCAACTACTTCGACCTGCTGATGACCGCGGCGCCGGGTAGTGCCT CGCCGACCTTCCTCGATGAGAACGTCCTGCGCGAGGGCGGGGGCGAGTTCCTCATGCGCGGCCGGCCGATGTTCGAGCATGCCAGCCAGACCCTGGTACG GATCGCCGGCGAAATGCTCGTGGCCCATGAGCTGACCTTGGACGACATCGACCATGTGATCTGCCATCAACCGAACCTGCGCATCCTCGATGCGGTGCAG GAGCAACTGGGCATTCCCCAGCACAAGTTCGCGGTGACCGTGGATCGTCTGGGCAACATGGCTTCGGCCTCGACCCCGGTCACGCTGGCGATGTTCTGGC CGGACATCCAGCCCGGACAGCGGGTGCTGGTCCTGACCTACGGTTCCGGCGCGACCTGGGGCGCGGCGCTGTACCGTAAACCTGAGGAGGTGAACCGGCC
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| DNA Sequence for Gene |
>T648_RS08980
ATGTTGAGGCTTTCGGCTCCCGGTCAACTGGATGATGACCTGTGCCTGTTGGGGGACGTCCAGGTGCCGGTGTTTCTGCTGCGTCTCGGTGAGGCGAGCT GGGCGCTGGTTGAAGGAGGGATCAGCCGGGATGCCGAATTGGTTTGGGCGGACCTGTGCCGCTGGGTCGCCGACCCGTCCCAGGTGCACTACTGGCTGAT CACCCACAAGCACTATGACCACTGCGGCCTGCTGCCCTACCTGTGTCCGCGGCTGCCGAACGTACAGGTCCTGGCGTCCGAGCGGACCTGCCAGGCCTGG AAGTCGGAAAGCGCGGTGCGGGTGGTCGAGCGCTTGAACCGGCAACTGTTGCGTGCGGAGCAGCGGTTGCCCGAGGCCTGTGCCTGGGACGCTCTGCCGG TTCGCGCGGTGGCCGACGGCGAGTGGCTGGAGCTGGGACCGCGGCATCGCCTGCAGGTCATAGAGGCCCACGGCCACAGCGACGATCACGTGGTTTTCTA CGACGTGCGACGCCGACGCCTGTTCTGCGGCGATGCCCTGGGCGAGTTCGACGAGGCAGAGGGGGTGTGGCGGCCGCTGGTGTTCGACGACATGGAGGCT TACCTGGAGTCCCTGGAACGTCTGCAGCGTCTGCCGACCCTGCTGCAACTGATCCCGGGACACGGCGGCCTGCTGCGGGGGCGGCTGGCCGCGGATGGGG CCGAGTCGGCCTATACCGAGTGTCTGCGCCTGTGCCGGCGGTTGCTCTGGCGCCAGTCCATGGGCGAGTCCCTCGACGAACTGAGCGAGGAGCTGCACCG CGCCTGGGGTGGGCAGAGCGTCGACTTCCTGCCCGGCGAACTGCACCTGGGGAGCATGCGCCGGATGCTGGAGATTCTCTCCCGCCAGGCGCTGCCTCTG GACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCGGGACATCCATTGCGGCGATCGCCGCCGACGGCAGCGGTCGCAATTGGGGGAAAAGGGGGTTATCGATGATGAACATGCCGTTGCGCGCTAGCGTCG CGCAGGCCAGTCGCCCATGGGCGCGGGGAGATGGCTCGTGAGCGGGGTTGGCTATCGACTGGAAGAAAGTCTGGAGTACCGCACGCTGGTGCCGGAGGCG CTGTCGATCTGGCGCATGGCCGGCGCCAACCGGATGCTGTTCGACTGCTTCGACGTGGACAGCAAGGCTGCGCGGCGTAGCGTGGCGATCCTTTCCAGCT GCCTGCGCATCGAGTGCTGGGGGCGCGATGTAGTGCTGCGGGCGTTGAACGCCAACGGACGCGCCTTGCTGGCACCGTTGAGCGAGGCCTGTCCGGCCCA GGTCACCTGCTTGCGTGACGGCGACACCCTGCACTGGCGCTTCCCCCAGGAAGAGTCGCAGGCGGACGAGTGGCGACGCCTGCATGGCCTGTCCAGCCTG
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| Amino Acid Sequence |
>quinolone signal response protein
MLRLSAPGQLDDDLCLLGDVQVPVFLLRLGEASWALVEGGISRDAELVWADLCRWVADPSQVHYWLITHKHYDHCGLLPYLCPRLPNVQVLASERTCQAW KSESAVRVVERLNRQLLRAEQRLPEACAWDALPVRAVADGEWLELGPRHRLQVIEAHGHSDDHVVFYDVRRRRLFCGDALGEFDEAEGVWRPLVFDDMEA YLESLERLQRLPTLLQLIPGHGGLLRGRLAADGAESAYTECLRLCRRLLWRQSMGESLDELSEELHRAWGGQSVDFLPGELHLGSMRRMLEILSRQALPL D
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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