Pseudomonas aeruginosa MRSN 317, T648_RS18800
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa MRSN 317 contig26, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TACCGATCTTGAAAAGGTCGAACACACTGATAGCCATGCCGGCCTCCGGGATTGCCGCGGCATCCGTGCCTGCGTAGTGGGGGTGGCGGCTCCTCCGCCC GCGATTCCTGCGCATCATCGGGCTTTCCCCGAGGCGGGCCGCATCCGCCACCGACCCGGCCATGTCCAAAAGCGCCGCGTCCGCGCCCGGATCGGGGAAC CTCTGCGGCCGGGGGGCGTCTGCACCTGCACGGCGTCGGAATGAGAACGGGCTCGCGCCGCTCCGAAAACGGCATCCGCTGGTCGCCGGCAAAGACCACT ATGATTGAATGCGACACAGCGGGTACTGAATGCGACCCCGCCTGCACTGGTTGCGACCCACCCTGTAGGCGACGGATGCGTCCTGTTTCATGATCGTTCA CGAATTGCCCGCTGAGGGCCGCTACCGGTCGGCCCGATACAGACAGACCGCCGCGCCCTTCGGGGTAGCGCCGGCGCCTTACCCTGCAGAGGAGTTCGCT
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| DNA Sequence for Gene |
>T648_RS18800
ATGAAAGGTTGCAAGTCTTGGCTGCTGGCCGTGTCTCTGTGCGCACCGCTGGCAGCCCAGGCCGCGGAGCCCGAATCCTGTGCGTCGGTGCGTTTCGCCG ACGTCGGCTGGACCGACATCACAGTGACCACCGCGGTCACCCGCCAGGTCCTCGAGTCCCTCGGCTACAAGACCAAGGTCAATCTGCTCTCGGTGCCGGT GACCTACCGCTCCCTGGCCAACAACGACCTCGACGTATTCCTGGGCAACTGGATGCCCACCATGACCAACGACATCAAGCAGTACGCCGAGAAAGGCACG GTCGAGACGCTGCGCGCCAACCTGGAGGGCGCCAAGTACACCCTGGCGGTTCCCCAGTACGTCTACGACGGCGGCCTGCGCAGCTTCGCCGATATCGCGA AGTTCTCCGACAAGCTGGGCAACAAGATCTACGGCATCGAGCCGGGCAACGACGGCAACCGCGTCGCCCAGAGCATGATCGACAAGAACGCCTTCGAACT GGGCAAGTTCAAGTTGGTGGAATCCAGCGAGGCGGGCATGCTCTCGCAGGTGCAGCGGGCCATCCGGCGCAACCAGTGGGTGGTGTTCCTCGGCTGGGAG CCGCACCCCATGAATACCCGCTTCCAGATGAAGTACCTGGAAGGCGGCGACGACTTCTTCGGCCCCAACTATGGCGGCGCGACCATCTACACCAACGTGC GCAAGGGCTACGCCCAGGAGTGCGCCAACGTCGGCCAACTGCTGAAGAACCTCAGCTTCACCCTCGAGATGGAGAACAAGCTGATGGACGCGGTACTCAA CGAAAACAAGAAACCCGAGGAAGCCGCTAAGGCCTGGTTGAAGGATCACCCGGAACAGCTGGATGCCTGGCTGGCCGGTGTCACCACGCGCGACGGGCAG CCTGCCGCAGCCGCGGCCAAGCTGGCGTTCGCCAAGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGACCGGTCGTTCATTTCCCGCTCTTGATGGACCCTGATTATGTTCCTGACTGATCACAAGCTCCCGCTGGGAGAGCAGATCGCCGGTTTCGTCGACTG GCTGACCCTGCATGGCGCATCGTTCTTCGACAAGATCTCCGACACCCTGGAGTTCCTCATCCATGGCGTCACCAACGGCTTGCTCTGGTTCAACCCGCTG GTGCTGATCGCCTTGCTGGTAGGGCTGGTGCATTTCATCCAGCGCAGCTGGGGGCTGACCGTGTTCGCCCTGGCCTCGTTGCTGCTGATCCTCAACCTGG GCTACTGGCAGGAGACCATGGAAACCCTCGCCCAGGTGATATTCGCCACCCTGGTGTGCATCGCCGTGGGCGTGCCGCTGGGCATCGTCGCCGCGCACAA GCCGTGGTTCTACACCGCGCTGCGGCCGTTGCTGGACCTGATGCAGACGGTACCGACCTTCGTCTACCTGATCCCGACCCTGACCCTGTTCGGCCTCGGC
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| Amino Acid Sequence |
>hypothetical protein
MKGCKSWLLAVSLCAPLAAQAAEPESCASVRFADVGWTDITVTTAVTRQVLESLGYKTKVNLLSVPVTYRSLANNDLDVFLGNWMPTMTNDIKQYAEKGT VETLRANLEGAKYTLAVPQYVYDGGLRSFADIAKFSDKLGNKIYGIEPGNDGNRVAQSMIDKNAFELGKFKLVESSEAGMLSQVQRAIRRNQWVVFLGWE PHPMNTRFQMKYLEGGDDFFGPNYGGATIYTNVRKGYAQECANVGQLLKNLSFTLEMENKLMDAVLNENKKPEEAAKAWLKDHPEQLDAWLAGVTTRDGQ PAAAAAKLAFAK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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