Pseudomonas aeruginosa MRSN 317, T648_RS18030 (ampC)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa MRSN 317 contig23, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCTGGAAGTCCGCCAGCCGCGGCAGCAGCCAGCCGACCGTGAAGGTTCCGACCGCGCCGACGGTGAGCACGTCCCGGTAGTGGCCGCCCTCGAAACGTTC CAGCAGGCCGGCGATGCGGTCGAAGGAGTCACACAGCACCGGCAGCAGGCTCTCGCCCTCGTGGGTCAGCATCAGGCCGCGCGGCAGACGCTTGAACAGG GCTACGCCGAGACGCTCCTCGAGGCTCTTCACCTGATGGCTGACCGCCGCCTGGGTCACGCACAGCTCGATGGCCGCGCGGGTGAAGCTCAGGTGCCGGG CCGAGGCTTCGAAGGCGCGCAGGGCGTTCAGCGGCAAATGGGGTCGAACCAATCTCTGCTCCAAATTTTTCTAATGGCTGCCGCGAGTATTCGTCGTTTG CCGCAAATCCTGCGCAAGCCTAGATTTTCCCCGCCCGCCGATCAAGGAGCGCTCCCGGGGCGGTTTCTCATGCAGCCAACGACAAAGGACGCCAATCCTC
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| DNA Sequence for Gene |
>T648_RS18030
|ampC
ATGCGCGATACCAGATTCCCCTGCCTGTGCGGCATCGCCGCTTCCACACTGCTGTTCGCCACCACCCCGGCCATTGCCGATGAGGCCCCGGCGGATCGCC TGAAGGCACTGGTCGACGCCGCCGTACAACCGGTGATGAAGGCCAATGACATTCCGGGCCTGGCCGTAGCCATCAGCCTGAAAGGAGAACCGCATTACTT CAGCTATGGGCTGGCCTCGAAAGAGGACGGCCGCCGGGTGACGCCGGAGACCCTGTTCGAGATCGGCTCGGTGAGCAAGACCTTCACCGCCACCCTCGCC GGCTATGCCCTGGCCCAGGACAAGATGCGCCTCGACGACCGCGCCAGCCAGCACTGGCCGGCGCTGCAGGGCAGCCGCTTCGACGGCATCAGCCTGCTCG ACCTCGCGACCTATACCGCCGGCGGCTTGCCGCTGCAGTTCCCCGACTCGGTGCAGAAGGACCAGGCACAGATCCGCGACTACTACCGCCAGTGGCAGCC GACCTACGCGCCGGGCAGCCAGCGCCTCTATTCCAACCCGAGCATCGGCCTGTTCGGCTATCTCGCCGCGCGCAGCCTGGGCCAGCCGTTCGAACGGCTC ATGGAGCAGCAATTGTTCCCGGCACTGGGCCTCGAACAGACCCACCTCGACGTGCCCGAGGCGGCGCTGGCGCAGTACGCCCAGGGCTACGGCAAGGACG ACCGCCCGCTACGGGTCGGTCCCGGCCCGCTGGATGCCGAAGGCTACGGGGTGAAGACCAGCGCGGCCGACCTGCTGCGCTTCGTCGATGCCAACCTGCA TCCGGAGCGCCTGGACAGGCCCTGGGCGCAGGCGCTCGATGCCACCCATCGCGGTTACTACAAGGTCGGCGACATGACCCAGGGCCTGGGCTGGGAAGCC TACGACTGGCCGATCTCCCTGAAGCGCCTGCAGGCCGGCAACTCGACGCCGATGGCGCTGCAACCACACAGGATCGCCAGGCTGCCCGCGCCACAGGCGC TGGAGGGCCAGCGCCTGCTGAACAAGACCGGCTCCACCAACGGCTTCGGCGCCTACGTGGCGTTCGTCCCGGGCCGCGACCTGGGCCTGGTGATCCTGGC CAACCGCAACTATCCCAATGCCGAGCGGGTGAAGATCGCCTACGCCATCCTCAGCGGCCTGGAGCAGCAGGCCAAGGTGCCGCTGAAGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCGCGCTCGCGAGGGCGACGGAGCGTAGCGGCGCGGGACGCCGGTCCTGGCTATGATGGTGCCATGAGCGCTTCCCCGCCCCTCCGCCAGCCCTGCCCG CCCGGCGCCTGCGTCTGCGAACGCGAGCGCCTGGAGGCGCCCGGCGCGGACCGTCGCATCCTCCTCCTGACCCGCCAGGAAGAGCAGCGCCTGGCCGCTC GCCTGGAAGCCCTGCGCAGCCTGGAAGACCTGGAACACCTGCTGCGGCGCATGGAGGAACAACTGGGCATCCGCCTGCGGATCGCCCCGGCCTTCGGCGA GGTGCGCAGCATGCGCGGCATCCGCATGCGCTTCGAGGAGCAGCCGGGGCTCTGCCGCAAGACCCGCCAGGCGATTCCCGCCGCCATCCGCCGCGGCCTG GAGAAGCGCCCGGAAGTCGCCTACGCCCTGCTCAACGCCCACGACCTGCTGCGCGACGCCTGAAGGCACTGAACGACAGGAAGAGGATGTCGCTCAAGAC
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| Amino Acid Sequence |
>class C beta-lactamase
MRDTRFPCLCGIAASTLLFATTPAIADEAPADRLKALVDAAVQPVMKANDIPGLAVAISLKGEPHYFSYGLASKEDGRRVTPETLFEIGSVSKTFTATLA GYALAQDKMRLDDRASQHWPALQGSRFDGISLLDLATYTAGGLPLQFPDSVQKDQAQIRDYYRQWQPTYAPGSQRLYSNPSIGLFGYLAARSLGQPFERL MEQQLFPALGLEQTHLDVPEAALAQYAQGYGKDDRPLRVGPGPLDAEGYGVKTSAADLLRFVDANLHPERLDRPWAQALDATHRGYYKVGDMTQGLGWEA YDWPISLKRLQAGNSTPMALQPHRIARLPAPQALEGQRLLNKTGSTNGFGAYVAFVPGRDLGLVILANRNYPNAERVKIAYAILSGLEQQAKVPLKR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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