Pseudomonas aeruginosa MRSN 317, T648_RS17885
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa MRSN 317 contig23, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATACCGATATTGCGTATGGGCGAAGGCTTTCTGAGGGATATGCAAGTTTCCTCGGT AGGATTTCGCGCAAATAAACGAACGCTATTTTTCAGGCGATAGTTTCAGCTTGTCGCGGAACTCTTTTTTCAAACTTTTTGCTGCTCTGGCTTGTCCGTT TCGTATTTCATCGCTTTTCATAAGTGTCTACGTAGACGTTTTTCGGGGGCTGTTTCAAGTGTCTTTGTTGTTAGTTTGCGAGGCGAAAAAATAGTAGTTT TACTATATTAAATATCGTCGGTTTCACTAGAAAATACACATGTTCACTTTGAACCGGGGCAGTGGCGTCGGCGGATTCCGGACCGCGCTTTCCTCCTTGC CGGCCGAGCGGCGGCCGCCTGCCTGCGGCAGGCATGACCGAGACCACAGGTTTCCTGGTAACGCTTTCGCCTGCCGTGTACCGCTTAAGGAGACGCAAGG
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| DNA Sequence for Gene |
>T648_RS17885
ATGTCCCTACATCGCATTCGCGTAATGGTTGCGGATGATCATCCCGCCATTTCGCTGGGTATTTCCTACGAACTGAGTCAGTGCGGTTCTTTGGAGATGC TCGGTCAAGTTTCCAATTCTACCGAGTTGATCGGCCGGCTCGACGAAGGCGACTGCGATGTCGTTATCGTCGACTATACGATGCCGGGCGGGAAATATGG CGATGGACTGGCATTGTTGTCATTGCTGCGACGACGTTATCCGCATCTGCAATTGGTCGTCTTTACCATGCTGAACAATCCGGGTCTTATCCGGGCCATT CTCAAGCAGGGTATCAATTGCATCCTCAGCAAGTCCGACTCGACCAGTCACCTGCTGGCGGCGGTGAGCGCGGCCTATTCGCGAAACCAGTATTTCTCGC CGTCGATCAGGGACATCTTCGTCAACCAGGTGCTTTCCTCGCACAACGAACGGCTGACGCCCCGGGAGGCGGAAATCGTCCGTCTGTTCGGCTCCGGACT GACCATCACCGAAATCGCCGAGCGCTCGCATCGCAGCGTGCAGACCATCAGTACGCAGAAGGTCAGTGCCATGAAGAAGCTCGGCATCAAGCGCGATGCC GACCTCATCAGGTATGCGGCCGAGGGCTATTGCCGGATGCCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGGATCGGCCCGCTTCACCAGGGCAGCGGCTGGTTCCGATAATCGACGAAGCGACAGGCATTCACGCCCGCGGCATCCTCCACCGCCGCGACCAGTCCGG CGGCGCTTTCCTCGACGCTCAGCGGCGCGCTGTCGCCGCCCATTTCGGTACGCACCCAGCCGGGATGCAGGAGCAACAGGCTGAACGGCAACTCCTCGAA CTCGCCCTCCCAGCTGCGTACCAGGCTGTTCAGCGCCGCCTTGCTGGCGCCGTAGAGCGGCATTGTGGCCGACAGGCCCAGCGCCAGGCTGGCCATCTGC GAACTCATGAACGCCACCACGCCACCCCGGCTAACCCGCCCGGACAGTGCCCTGGCCAGGCGCAGCGGCGCGATGGCGTTGGTCAGGAACAGCTGGGCGG TCTGCTCGGCGTCGATTTCCGCCACATCCTGTTGCTGCGGGCCGTAGATGCCGGCGTTGACGATCAGGCGATCGATCCGCCGCTCGCCCAGCGCCTCGCC
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| Amino Acid Sequence |
>transcriptional regulator
MSLHRIRVMVADDHPAISLGISYELSQCGSLEMLGQVSNSTELIGRLDEGDCDVVIVDYTMPGGKYGDGLALLSLLRRRYPHLQLVVFTMLNNPGLIRAI LKQGINCILSKSDSTSHLLAAVSAAYSRNQYFSPSIRDIFVNQVLSSHNERLTPREAEIVRLFGSGLTITEIAERSHRSVQTISTQKVSAMKKLGIKRDA DLIRYAAEGYCRMP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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