Pseudomonas aeruginosa MRSN 317, T648_RS12175
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa MRSN 317 contig10, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AATGCGCGGTACTGCTCTGCGAAGGCGATGTGCTGCTGGCCGAACACTTTTCCCTGCGCGCGCCCCCGGAAGCGGAGGCGCCGCTCAAGCTGCGCGAGCA CCTGGAGCAGATCGAGCGCGACCTGCTGCTCGCCTGCCTGCGCAGGAACGCTGGCAACCAGACCCTCGCTGCGCGCGAACTGGGTCTGCCGCGCCGAACC CTGATCTATCGCATGGGACGCCTGAACATTCATTTCGGCGATCCCCGGACCTGAAGCCCATGATCGAGATTTCCTTCCATCCAGCCCTGCCGGGCGCGCG CCTGGAGCGCGGCGTCCGCGGCCCTTCCATGGAGACTCCCTGATGCCTGTTCGTCACTGGCCCGCCGTGCTTCTGGCCCTGGCCGTCCTCTGCGGCCTCG CCGGTTGCAGCGGCAACTACAAATTCAACGACGGCGACTATCGCCCGCTTGGCGATCCGCAGGCGGTCAATCGCGGCAAGTGACCGCAAGGAGCGATCTC
|
|
| DNA Sequence for Gene |
>T648_RS12175
ATGGAACTGGTATTGGAAATGCTCAGCGCCAAGCAATTCGTACCGACGGAGCTGTGCAGCAAGACCTTCGGCAGGAACGGCGGCCTCATCGGCCGCGGCG GTGAGTGCGACTGGGCGATTCCCGATCGCAAGCGGCACCTGTCCAAGCAGCATGCGCGGGTCAGCTATCGCAACGGCGCGTTCTACCTGACCGACACCAG CAGCAACGGCATCCGCGCCGGCAACGGCAGCCGCCTGCCGCATGGCGAGCCGCAGCGCATCGAGCAGGACAGCGTCTTCCTGCTCGGCGACTTCGAGATC CGCGCGCGGCTGCTGCGCGAGCCCGACGAGTTCGCCATGGACGTCGGGCGGCCGCAGCCGGCGGGCAGCATCATTCCGGACGATGCCTTCCTGGCCCTCG ATCCGTTGCAGGCGCTCGACCAGGACGGTGCAGATGCCTACGAACTCGACGACCTGAGCGCGATCGCCCAGCCCAGCCAGGAGGCCGGGGCGCGTGCGGA CTACGCGCGGATCGACATGGAAAGCCTGGTCGTACCGGAGCTGGTGCCCGCCCCGGCGGCTCCGCAGGAACCCGTGGAAAGTCCGCGTTCGGGTCACGAC GAAGCCTTCTGGCAGCGTTTCGGCCAGGCTCTGGGAATGGACCTCGAAGGCCTCGACGGCCCTGCGCGCGAAGCGCTGGCGATCAACGCCGCCGGTTTGC TGCGGCAGTGCATCGGCGGCTTGCAGCAGAGCCTGCGGACCCGCAGCGAACTGAAGAACGAACTGCGCCTGTCGCTGAGCACGTTGCGCGATACCGGCAA GAATCCCTTGCGCTTCAGCGCCGATGCCGGCGAGGCGCTGGGTCATCTGCTACGGGATGGCAAGCCTGGCCAGTTGAGTGGCGAACAGGCCGTCGCACGC AGTTTCCGCGACCTCCAGGCGCACCAGGTGGCGCTGCTCGGCGCCAGCCGGGCGGCGGTGCGCGCGACCCTCGAGCATTTCTCGCCGCAGCAGCTGACCC TGCGTTTCGAGCGCGACGGCCGCCGGCCGTTGCTGGCCACCGCGGGCAGCCGTTGGCGTGCCTACGGTCGCTACCACCAGTCGCTATGCCAGGACGACGA CTGGAGCGAGCGCCTGCTGGCGCGTGATTTCGCCCAGGCCTACGAAGAGCAGGTTCGCCTGATTTCCACCCTCTACACCGAGCACCAAGGATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TCGCCATGTCTCGTCGCCCGATCCCGCCAGCCAGGGCGCTGGCCATGCTCGCCGTCCTGGCGCTGCTGGCCGGCTGTTCCACGCTGTCGCCGTATTCCAG ACTGACCAAGCTCGACCTCGCCCTGAGCGCCGGCGAGCGGGTCAATCCCGACCTCAATGGCCGGCCGTCGCCGGTGGTAGTGCGGCTGTTCGAGCTGAAG CACCCGGTGGCGTTCGAGAACGCCGACTTCTTCAGCCTCTACGAACGTCCCAAGGAGACCCTGGACCCCGACCTGGTGACCAGCGAGGAGCTGGAGCTGC GGCCCGGCGAGCGGGTCGAACTCAAGCTCAGCGTGGAGGAGGGGAGCCGCTACGTGGGCGTGCTCGCCGCCTACCGCGATCTCGGCGAGGCAAGCTGGCG CTACGTGGTGCCGGTCACGGCGAAAGAGCTGACCCGGGTAGAGCTGAAGCTGGGCCGGAAGGGCATCCTGAATGCCGGCGAACTGCTCGGCAAGGCGGGT
|
|
| Amino Acid Sequence |
>hypothetical protein
MELVLEMLSAKQFVPTELCSKTFGRNGGLIGRGGECDWAIPDRKRHLSKQHARVSYRNGAFYLTDTSSNGIRAGNGSRLPHGEPQRIEQDSVFLLGDFEI RARLLREPDEFAMDVGRPQPAGSIIPDDAFLALDPLQALDQDGADAYELDDLSAIAQPSQEAGARADYARIDMESLVVPELVPAPAAPQEPVESPRSGHD EAFWQRFGQALGMDLEGLDGPAREALAINAAGLLRQCIGGLQQSLRTRSELKNELRLSLSTLRDTGKNPLRFSADAGEALGHLLRDGKPGQLSGEQAVAR SFRDLQAHQVALLGASRAAVRATLEHFSPQQLTLRFERDGRRPLLATAGSRWRAYGRYHQSLCQDDDWSERLLARDFAQAYEEQVRLISTLYTEHQG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|