Pseudomonas aeruginosa Carb01 63, YQ19_RS34785
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain Carb01 63, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GAAAGGTGATAGCCCAACTAAGCATGATGTTTTCTCCTGTGTGCCTTCGGAACTGTCGGTACCGCCTCGGGGCCAGGCCCATCGGGGTAGCGAACCGGCC TGTGTCCATTTTTTTCTTCAGGGAGACCGTGACTACCTCATTGCACGCCGCATGCCAGCCTTTCTGAAAAATAAAAACACTTTTAATTCAATAAGTTATA AAACAACCCAGGTAGTCTGCGCAGTTCATCCTGCACGACGCGACAAATTATTCCGGGCGTTTTGCACGATCGGCGCGGTACGCTGTCACATGCAACAGGG AAGCGACCCGGCACCTGCTACCCGGAGCCATCCGTGGAGCCGCCACGGCTTCCCGAAAACCCAAGAACAGACATCGGCGGGTTGCACGCCGCCCTGGCCG CCCGGATGGGCGGCGGGGCGCTCTGCAACTTGCATGGGCTTTCCGGGGACTAACCCAGAAGCCGAATGGCAGTGAATTCCCTAGAGGATAAAAAGCAACG
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| DNA Sequence for Gene |
>YQ19_RS34785
ATGGAAACCACTTCCGAAAAACAGGGGCGCATCCTGCTGGTCGATGACGAGTCGGCGATCCTGCGCACTTTCCGTTATTGCCTCGAAGACGAAGGCTACA GCGTGGCCACCGCCAGCAGCGCGCCGCAGGCGGAGGCCCTGTTGCAGCGCCAGGTATTCGACCTGTGCTTCCTCGACCTGCGCCTGGGCGAAGACAACGG GCTCGACGTTCTCGCCCAGATGCGCGTCCAGGCGCCATGGATGCGCGTGGTGATCGTCACCGCGCATTCGGCGGTGGATACCGCGGTCGATGCCATGCAG GCCGGCGCGGTGGATTACCTGGTCAAGCCCTGCAGCCCGGACCAACTGCGCCTGGCCGCCGCCAAGCAACTGGAGGTGCGCCAACTGACCGCGCGCCTGG AGGCCCTGGAGGACGAAGTGCGCCGCCAGGGCGACGGCCTGGAATCGCACAGCCCGGCCATGGCCGCGGTACTGGAGACCGCGCGCCAGGTAGCGGCGAC CGACGCCAACATCCTCATCCTCGGCGAATCCGGCTCCGGCAAGGGCGAACTGGCACGCGCCATCCACACCTGGAGCAAACGCGCGAAGAAGCCCCAGGTC ACCATCAACTGCCCGTCGCTGACCGCCGAACTGATGGAAAGCGAACTGTTCGGGCACAGTCGCGGCGCCTTCACCGGTGCCACCGAAAGCACCCTGGGCA GGGTCAGCCAGGCTGACGGCGGCACCCTGTTCCTCGACGAGATCGGCGACTTCCCGCTGACCTTGCAACCCAAGCTGCTGCGCTTCATCCAGGACAAGGA ATACGAACGCGTCGGCGATCCGGTGACCCGCCGCGCCGACGTACGCATCCTTGCCGCGACCAACCGCGACCTGGGCGCGATGGTCGCCCAGGGCCAGTTC CGCGAGGACCTGCTCTACCGCCTCAACGTGATCGTGCTCAACCTGCCTCCCCTGCGCGAACGCGCCGAGGATATCCTCGGCCTGGCCGAACGTTTCCTCG CCCGCTTCGTCAAGGACTACGGCCGCCCCGCCCGCGGCTTCAGCGAAGCCGCCCGCGAGGCCATGCGGCAATACCCCTGGCCGGGCAACGTACGCGAGCT ACGCAACGTGATCGAACGCGCCAGCATCATCTGCAACCAGGAACTGGTGGATGTCGACCACCTCGGTTTCAGCGCTGCGCAATCTGCCAGCAGCGCGCCG CGGATCGGCGAATCGCTGAGCCTGGAAGACCTGGAGAAAGCCCATATCACGGCGGTGATGGCCTCCAGCGCGACCCTCGACCAGGCCGCCAAGACCCTCG GTATCGATGCCTCGACCCTGTACCGGAAGCGCAAGCAGTACGGCCTATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCATGCCGCTGCCGATGAAGCTCCGGACCCGGTTGTTCCTCAGCATTTCCGCGCTGATCACCGTCTCGCTGTTCGGCCTGCTGCTCGGGCTGTTCAGCGT GATGCAGCTCGGCCGCGCCCAGGAACAACGGATGTCGCACCACTACGCGACCATCGAGGTGAGCCAGCAACTGCGCCAGTTGCTCGGCGACCAGTTGGTC ATACTGCTCCGCGAAACCCCCGACGGGCAGGCCCTGGAGCGCTCGCAAAACGACTTCCGACGAGTCCTGGAACAGGGCCGGGCGAATACCGTCGACAGCG CCGAGCAGGCCGCCCTGGATGGCGTCCGCGACGCCTACCTGCAACTGCAGGCGCACACCCCGGCCCTGCTCGAGGCGCCCATGGCCGACAACGACGGCTT CAGCGAAGCCTTCAATGGCCTGCGCCTGCGCCTGCAGGACCTGCAGCAACTGGCGCTGGCCGGCATCAGCGACGCCGAGACCAGCGCCCGCCATCGTGCC
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| Amino Acid Sequence |
>alginate biosynthesis transcriptional regulatory protein AlgB
METTSEKQGRILLVDDESAILRTFRYCLEDEGYSVATASSAPQAEALLQRQVFDLCFLDLRLGEDNGLDVLAQMRVQAPWMRVVIVTAHSAVDTAVDAMQ AGAVDYLVKPCSPDQLRLAAAKQLEVRQLTARLEALEDEVRRQGDGLESHSPAMAAVLETARQVAATDANILILGESGSGKGELARAIHTWSKRAKKPQV TINCPSLTAELMESELFGHSRGAFTGATESTLGRVSQADGGTLFLDEIGDFPLTLQPKLLRFIQDKEYERVGDPVTRRADVRILAATNRDLGAMVAQGQF REDLLYRLNVIVLNLPPLRERAEDILGLAERFLARFVKDYGRPARGFSEAAREAMRQYPWPGNVRELRNVIERASIICNQELVDVDHLGFSAAQSASSAP RIGESLSLEDLEKAHITAVMASSATLDQAAKTLGIDASTLYRKRKQYGL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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