Pseudomonas aeruginosa Carb01 63, YQ19_RS24780
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain Carb01 63, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCCCGCCAGGTGTAGAACGAGGCATCACTGAAGCCGTGTCGGCGACACAGTTCCTTCACCGGCACACCGGCCTCCGCTTGCTTGAGGAAGTCGAGAATCT GCTCTTCGGTAAAACGCTTTTTCACTGCCGTCTCCTGCTCGGAAAACGGACTCTACTAAGTTCGGCGTGGTACTGAAATCGGGGAGCAGGTCATATCTTC ACCCTTGAATTGTGTTGCGGATCAAGTAGCTGAATTTTGCAGAGAGCATCACATACCCAGCGTGAATCTTGCGCGCATGAACTCGTTATCAGAGATACAT GACTCTTAGGGAATATCCCGTGGGCTCAGCCAATCCCACTCCTGAATATCGAGTTTAAGCAACCGTGATTATTACCACTATATCACAGCGCATTGACGTG CCTTCTTAGTGTATTGCCCGCACATTGAAGCCATGGGGTTCAATTTCTAGAACTGAATCGGCACTGTTTCTGTACCACACTCACCAATGGAGAAGTCTAA
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| DNA Sequence for Gene |
>YQ19_RS24780
ATGTCCAATGACAACGAAGTACCTGGTTCCATGGTAATTGTCGCACAAGGTCCAGACGATCAATACGCATACGAGGTTCCCCCTATCGATAGCGCGGCCG TTGCCGGGAATATGTTTGGCGACTTAATTCAAAGAGACATATATCTACAGAAAAACATTTATTATCCAGTCCGATCTATTTTTGAACAAGGAACAAAAGA AAAGAAGGAGATCAACAAGAAAGTATCTGTTCAAGTCGATGGCTTGCTAAAGCAGATCACTCAAGGAAAAAGGGAGGCCACAAGGCAAGAGCGAGTCGAT GTCATGTCGGCAGTCCTGCACAAGATGGAATCTGATCTTGAAGGATACAAAAAGACCTTTACCAAAGGCCCATTCATTGACTACGAAAAGCAGTCAAGCC TCTCCATCTATGAGGCCTGGGTCAAGATCTGGGAGAAGAACTCTTGGGAAGAAAGAAAGAAGTACCCTTTTCAGCAGCTTGTTAGAGATGAACTGGAGCG GGCGGTTGCCTACTACAAACAAGATTCACTCTCTGAAGCGGTAAAAGTGCTAAGACAGGAGCTCAACAAGCAAAAAGCGCTAAAGGAAAAAGAGGACCTC TCTCAACTGGAGCGGGACTACAGAACCCGAAAGGCGAATCTCGAGATGAAAGTACAATCCGAGCTTGATCAAGCGGGAAGTGCTTTGCCTCCATTGGTCA GTCCAACGCCAGAGCAATGGCTTGAACGTGCCACAAGACTGGTTACGCAAGCAATTGCTGATAAAAAGCAGCTGCAGACCACAAACAATACTCTTATCAA GAATTCCCCAACCCCTCTAGAAAAGCAGAAAGCCATCTACAATGGTGAGCTACTTGTGGATGAGATAGCCAGTCTACAGGCCCGCTTAGTTAAGCTGAAC GCCGAAACGACACGACGCAGGACAGAAGCAGAACGCAAGGCGGCCGAGGAACAAGCGTTGCAAGATGCTATTAAATTTACTGCCGACTTTTATAAGGAAG TAACTGAGAAATTTGGCGCACGAACATCGGAGATGGCGCGCCAACTGGCCGAAGGCGCCAGGGGGAAAAATATCAGGAGTTCGGCGGAAGCAATCAAGTC GTTTGAAAAGCACAAGGATGCGTTAAATAAAAAACTTAGCCTTAAAGATAGGCAAGCCATTGCCAAAGCCTTTGATTCTCTAGACAAGCAGATGATGGCG AAGAGCCTTGAGAAATTTAGCAAAGGCTTTGGAGTTGTAGGCAAAGCTATTGACGCCGCCAGCCTGTACCAAGAGTTCAAGATATCTACGGAAACCGGGG ACTGGAAACCATTCTTTGTAAAAATTGAAACACTAACTGCTGGTGCGGCCGCCAGTTGGCTTGTGGGTATTGCATTTGCCACGGCAACAGCCACTCCTAT AGGCATTCTGGGGTTCGCACTGGTAATGGCAGTTACCGGGGCGATGATTGACGAAGACCTTCTAGAAAAAGCAAACAATCTTGTAATATCCATTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AACCAAGCAAGGCCTCATTAAACCCTACGAGGCCTTTCCATACTTATAGAATAAAAAAACCATCCCCAAGGGAATTGAAAACAAATAACAAGACAAATAA AAGACTGCATACAAACCTGTTTTGGCAGGGGTTTCGGAGAAAAAACCCGTGACCCAGAACTCTCTTTCCGTATATTTTAAAGCGAAGTCTCCAACAAGCT TTACCGAGAAAGGAAACAGGATAGTACTGAGCCCAGCCACTACCAAGGGGTTAACTGATGCCAGGCTGGGAAATACGGAGCCTTTCCAAGCCACTAAAAC AAAGAAGAAAGCTCCCCAGAAAAACTTAGCCCAATAGTATTTAAAGCTCAATTAGCACCCCGTTCTGTCTGACCTGAGTTCAACAAAGCGTTCTAAACGA TTAGAACTTCTATCTTATCCATTTCTAACAACGATTCCCACCTAGCTCCCTTTAGGCGTAACATGAAAAACCTTCATCGCTCCTAATCCGTTTCCCTTAC
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| Amino Acid Sequence |
>pyocin S5
MSNDNEVPGSMVIVAQGPDDQYAYEVPPIDSAAVAGNMFGDLIQRDIYLQKNIYYPVRSIFEQGTKEKKEINKKVSVQVDGLLKQITQGKREATRQERVD VMSAVLHKMESDLEGYKKTFTKGPFIDYEKQSSLSIYEAWVKIWEKNSWEERKKYPFQQLVRDELERAVAYYKQDSLSEAVKVLRQELNKQKALKEKEDL SQLERDYRTRKANLEMKVQSELDQAGSALPPLVSPTPEQWLERATRLVTQAIADKKQLQTTNNTLIKNSPTPLEKQKAIYNGELLVDEIASLQARLVKLN AETTRRRTEAERKAAEEQALQDAIKFTADFYKEVTEKFGARTSEMARQLAEGARGKNIRSSAEAIKSFEKHKDALNKKLSLKDRQAIAKAFDSLDKQMMA KSLEKFSKGFGVVGKAIDAASLYQEFKISTETGDWKPFFVKIETLTAGAAASWLVGIAFATATATPIGILGFALVMAVTGAMIDEDLLEKANNLVISI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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