Pseudomonas aeruginosa Carb01 63, YQ19_RS22935
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain Carb01 63, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGGCTTCATGATCTTCATCCCGTTCCTGATCATCGACCTGGTGGTGTCCAGCGTGCTGATGGCGATGGGCATGATGATGCTGTCGCCGCTGATCATTTCC CTGCCGTTCAAGATCATGCTGTTCGTCCTGGTGGATGGCTGGGCGCTGATCATCGGGACGCTGGCGGGCAGTTTCGGCACCGTCTAGCGGTGCCGCCGGC TTGACGCGCCGCTGGCGCGCTGGAGAGAGACATGACCCCTGAGGTGGCACTCGACCTGTTCCGCGAGGCGTTGTGGCTGACGGCGATGATCGTCGGCGTG CTGGTGGTTCCGAGCCTGCTGGTCGGTCTCGTGGTGGCGATGTTCCAGGCCGCCACCCAGATCAACGAACAGACCCTGAGCTTCCTGCCGCGCCTGATGG TGATCCTGCTCACCCTGATCGTGCTGGGCCCCTGGCTGCTGCGGCAGCTGATGGAGTACACCCAGACGCTGATCGGCAACATCCCGCTGCTGATCGGCTG
|
|
| DNA Sequence for Gene |
>YQ19_RS22935
ATGCTGGAGCTGACCAACGCGCAGATCGGCGGCTGGATCGCCAGCTTCGTGCTGCCGCTGTTCCGGGTCGCGGCGCTGCTGATGACCATGCCGGTGATCG GCACCCAGCTGGTGCCGGTGCGGGTGCGCCTCTACCTGGCGCTGGGCGTCTGCGTGGTGCTGGTGCCGAACCTGCCGCCGATGCCGCAGGTGGACGCGCT GAGCATGAAGGCCATGCTGCTGATCGGCGAGCAGATCCTGGTCGGCGCCTTGCTCGGCTTTTCCCTGCAGTTGCTGTTCCACGCCTTCGTGATCGCCGGG CAGATCATCTCGATGCAGATGGGCCTGGGCTTCGCTTCCATGGTTGACCCGGCCAACGGCGTCTCGGTGCCGGTGCTCGGCCAGTTCTTCACCATGCTGG TGACGCTGCTGTTCCTGGCGATGAACGGGCACCTGGTAGTGTTCGAGGTAATCGCCGAGAGCTTCGTCACCCTGCCGGTGGGCGAGGGCCTGAGCGGCAA CCATTTCTGGATCATCGCCGGCAAGCTCGGCTGGGTGATGGGCGCGGCACTGCTGCTGGCGCTGCCGGCGATCACCGCGCTGCTGGTGGTGAACCTCGCC TTCGGCGCCATGACCCGCGCGGCGCCGCAACTGAACATCTTCTCCATCGGCTTTCCGTTGACCCTGGTGCTGGGCCTGGTGATCCTCTGGATCGGCACCG CCGACCTGCTCAGCCAGTACCAGGTGCTGGCCGGCGAGGCCCTGCAATTCCTCCGTGAACTGGTGCGGGCGAAATAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCATGGCCGAGAGCGAGAGCGGGCAGGACAAGACAGAGGAACCCACGGAGAAACGCCGCCGCGAGGCGCGCGAGAAAGGGCAGTTGCCGCGTTCGCGGGA GCTGAACACCCTGGCCATCCTCATGGCCGGCGCCGGCGGCCTGCTGATCTACGGCGCCGACCTGGCGGGCGCCCTGTTGCGCCTGATGCGCAGCAATTTC GAGCTGTCCCGGGAAACCGCGATGAATACCGAGAGCATGCTGCAATTGCTCGGCGCTTCGGCCTACCTGGCTGCCCAGGGGCTCTGGCCGATCCTGCTGA TGCTGCTGGTGGCGGCGATCGTCGGGCCGATCGCCCTCGGCGGCTGGCTGTTCTCGATGGACGCCCTGCAACCCAAGTTCAGCCGGCTCAACCCGCTGTC GGGGCTGAAGCGGATGTTTTCCGCCAAGTCGCTGCTCGAACTGAGCAAGGCGCTGATCAAGTTCCTGGTGGTGCTGGCGGTGGCCCTGCTGGTGCTCTCC
|
|
| Amino Acid Sequence |
>flagellar biosynthesis protein FliR
MLELTNAQIGGWIASFVLPLFRVAALLMTMPVIGTQLVPVRVRLYLALGVCVVLVPNLPPMPQVDALSMKAMLLIGEQILVGALLGFSLQLLFHAFVIAG QIISMQMGLGFASMVDPANGVSVPVLGQFFTMLVTLLFLAMNGHLVVFEVIAESFVTLPVGEGLSGNHFWIIAGKLGWVMGAALLLALPAITALLVVNLA FGAMTRAAPQLNIFSIGFPLTLVLGLVILWIGTADLLSQYQVLAGEALQFLRELVRAK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|