Strain | Pseudomonas aeruginosa strain Carb01 63, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GCACGTTTCCAGGAGGCCACAAGGATGCCTGCAATACCCCTGCGCGCCATGGTGCTGTGCGCCAACCCCGGCCGTTTGCTCAGGTACGGAGCGCTGTTCA ACCGCTGCGGCTACTTCCACCTGAGCCTGTGCCTGGACCGACGGGAGCTGCGGCGCTCCCTGGACCAGGGTTACCCGTACGACTATTGCCTCTACGACGG ATTCCGCCTGGACCAGGGCTGCAAGGGCACGCTGGCGATGCTGGGACGCAGCGGCAGCATCCGGCGCTTCCTGCTGGTGGGCGAACTCGATTGCCGCGAG AAGCGCCTGTTGTTCGAGTGGAGCAGAGGCCATGGCCTGAGCATCGGCGCGGTGTCCGACCGGCCTTTGGGCCAGGTCGCCCTGGCCGCGTTGATCAACC GTGATCGCGGCTGCCCCGACCTCATGCGCGGCATCGCCTGAGGCGGCTCCCGGGAAGATGAGGTAAGGTCGTTTTCCAACCTTCCATGGCGAGACAGCGC
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DNA Sequence for Gene |
>YQ19_RS22830
ATGACCGTCCAGGCCGACATCCTCAAGGCGATCGAAGGCATCGAGCATGGCTTCCAGCAAGCCGGCCAGGCACTCTCCGAGCGGATATTCCATTGCCGGC AGGTGCATGGCGCCGAGATCGTCGACGCGCGCTCGCTGTCGGAATCGGGGCGGTATGCCGCCGACGGCGTCTTCAGCGAAGGGCCGTTGGCGGTCGCGGT GGTCACCGCGGACTGCCTGCCGATTCTCATGAGCAGCCGCGACGGTCGGGTGGTGGCCGCCCTGCATGGCGGCTGGCAGGGGCTCGTCGCCGGTATCGTC GGCGCGGCGGTGGCGCGCTTCAATGCGCGCGGCGTCGCCAGCGCGGACATCCGGGTCGCCATCGGTCCCGGGATCAAAGCCTGCTGCTACGAGGTGAGTG CCGGGTTCATCGAGGCGTTGCAGGTCGGCCACGGCCGCCTCTGGGAAGGCGCGGCGCCTCCCTGGAGCCAGCGTCGTCCGCTCCCCGAGCGGCCGCCCCG GTTCGCTCCGCCCGAGCCAAGGCAGGCGGAGCAGGGCGCCTGGCTGGACCTGGTGGCCTTCTGTCGCCAGTTGTTCCAGGCCGCCGGCGTCGGGCCGGCG CAGATCGAAGCCAGCGCCGTCTGCACCTACTGTTCCGGCGATGCGTTCGCCAGTCATCGCCGACGCCAGCGCCTGGGCGAGGAGAAGCGTCAGCAGTACG CCTGGATCGCGCGCAAGCCGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCGCGTATCGGTATTGTCCGGAAATCCTGGATAGTCATGACGGTTGTCTGCTGTTTATCCGCCAATAGCCGGCTTCTAGACTTTTCTTGTCGATGCGTGG CTGTCGCCACGCTCATTCCAGGAGAGTCCCAGCATGCCTGACATCACCCAAGCCGCCATCGTCACCGGCGCCTCCCGCGGCATCGGTCGCGCCATTGCCC GGCGGCTGGCCGCCGACGGTTTCGCGGTCGCGGTCAACTATGCCAGCAACCAGGCCATGGCCGACGAGGTCGTGGCCGAAATCGTCGCCGCCGGCGGCGC GGCCATCGCCGTGCAGGGCGACGTGGCCAGCGCGGAGGACATGGACAAGCTGTTCGAAGCCACCAGGGGCGCCTTCGGCCGCATCGACGTGGTGGTCAAC AGCGCCGGCACGATGCCCTACCTGAAGATCGCCGATGGCGACCTGGAGGGCTTCGACCGGGTGATCCGCACCAACCTGCGCGGCGCCTTCATCGTGCTTG
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Amino Acid Sequence |
>hypothetical protein
MTVQADILKAIEGIEHGFQQAGQALSERIFHCRQVHGAEIVDARSLSESGRYAADGVFSEGPLAVAVVTADCLPILMSSRDGRVVAALHGGWQGLVAGIV GAAVARFNARGVASADIRVAIGPGIKACCYEVSAGFIEALQVGHGRLWEGAAPPWSQRRPLPERPPRFAPPEPRQAEQGAWLDLVAFCRQLFQAAGVGPA QIEASAVCTYCSGDAFASHRRRQRLGEEKRQQYAWIARKP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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