Pseudomonas aeruginosa FRD1, UC33_RS30975
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0015074 | DNA integration |
Inferred from Sequence Model
Term mapped from: InterPro:PF13683
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ECO:0000259 match to InterPro signature evidence used in automatic assertion |
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| Molecular Function | GO:0003676 | nucleic acid binding |
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.30.420.10
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF53098 | Ribonuclease H-like | IPR012337 | Ribonuclease H-like superfamily | 1 | 157 | 3.79E-41 |
| NCBIfam | NF033516 | NCBIFAM: IS3 family transposase | IPR048020 | IS3 transposase | 1 | 152 | 4.2E-48 |
| Pfam | PF13683 | Integrase core domain | IPR001584 | Integrase, catalytic core | 84 | 149 | 4.2E-32 |
| PANTHER | PTHR47515 | LOW CALCIUM RESPONSE LOCUS PROTEIN T | - | - | 1 | 165 | 5.9E-85 |
| Gene3D | G3DSA:3.30.420.10 | - | IPR036397 | Ribonuclease H superfamily | 1 | 165 | 2.5E-27 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.