Pseudomonas aeruginosa FRD1, UC33_RS29780
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain FRD1 contig_17_scaffold07, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGGAACCAGTTGCCCGAGTCGTCGTGCCATTCATAGGCGAAGCGCACGGCGATGCGGTTGCCGGTAAACGCCCAGAGTTCCTTGATCAGCCGGTACTCCT GCTCGCGCTGCCACTTGCCGCTGAGGAATTCGACGATCCGCTCGCGGCCGCGGACGAAGGTCGAGCGATTGCGCCAGACGCTGTCGGGACTGTAGGCCAG CGAGACGCGCTGCGGGTCGCGGCTGTTCCAGCCGTCCTCGGCGGCGCGGACCTTCTGCGCGGCGGTTTCGGCGGTGAAGGGGGGAAGCGGGGGACGGACG TCGCTCATGGCGGGCTCCTCGGTCTGCGGTGGTTTTCGATGGGAACAGCGTAGGGCAGGGCGAGCGCGGCCGAATGACGTCGATCCCACGGATCCTGCCA ATCCCGCCTCGCCCCCTGGCTGTTTGCCAGGCTGGCCAGACCTACCCCGGAGAGGGCTATGATGGCCGCCACCGGAGTGGACAAGGATCGACCTCGCGCA
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| DNA Sequence for Gene |
>UC33_RS29780
ATGACCTCCACCACCTACCTCGGCCTGCTGCTGGTCGGTATCCAGGTACTCGGCTTCGTCGCGGCCATCCATGCCGTGCTCACCGTGCGCACCGCCCAGG GCGCGATCGCCTGGGCCACCTCGTTGGTATTCATGCCGTACCTGACCCTGCTGCCGTACCTGGTGTTCGGTCGCAGCCGTTTCGACGCCTACATCGAGGC GCGGCGCCAGGCCAACCGCGAGATGCACCTGGCGGCCGCCGAGCTGGACTGGCGTCCCTGGGTCGAGGAGGCCCTGGCGGCCCGCCAGGTCAGCGGCTAC AAGGGGCTCAAGGCGCTGGTGCGGATGACCCGCACGCCGACCCTGGCGAACAACCGGGTGCGCCTGCTGGTCAACGGCGAGGCCAGCTTCGAGGCGATGT TCAAGGCGATTTCCGCCGCCCGCCAGGTGATCCTGGTGCAGTTCTTCATCGTCCGCGACGACGCCCTCGGCCAGCGCCTCCAGCAACTGCTGCTGGAACG TGCGGCCAACGGCGTCGAGGTGTTCTTCCTCTATGACGCCATCGGCAGCCACGCGCTGCCGCACCGCTATGTCGAGCGGCTGCGCCAGGGCGGCGTGCAG ATGCATGGCTTCAGCACCGGCAGCGGCATGCTCAACCGCTTCCAGGTGAATTTCCGCAACCACCGCAAGGTCGTGGTGGTGGATGGCGAGTGCGGTTTCG TCGGCGGGCACAACGTCGGCGTCGAGTACCTCGGCGAGAAGCCGCCGCTGGCGCCCTGGCGCGACACCCACATGGAACTGCGCGGGCCGGCGGTGGCGTG CCTGCAGGAAAGCTTCGCCGAGGACTGGTACTGGGCGACCCACAGCCTGCCGCCGCTGATCCTGCCGCCGCAGTACGACAGCGAGGGCGCGCTCTGCCAG GTAGTCGCCAGCGGTCCGGCGGATGCCCAGGAAACCTGCTCGCTGTTCTTCGTCGAGATGATCAACGCCGCCCACGAGCGGGTCTGGATCACCTCGCCGT ATTTCGTTCCCGACGAAGCGGTGATGGCCGCCCTGCGCCTGGCGGTGCTGCGCGGCGTCGACGTGCGCCTGCTGATACCCTCGCGCCCGGACCACCGCAC GGTGTATGCCGCGTCCAGCCTTTACGCGCTGGAGGCGATCCGTGCCGGGGTCAAGGTGTTCCGCTACCAGCCCGGCTTCCTCCACCAGAAGGTGGTGCTG GTGGACCGCGACACCGCCGCCGTCGGCAGCGCCAACCTGGACAACCGTTCGTTCCGGCTGAATTTCGAGGTGATGGTGGTGACCGTCGACGAGGGCTTCG CCGGCGAGGTGGAGGCGATGCTCGAGGCGGACTTCGCCGAGTCGCTCGAATTCACTCCGGAAGACCGCCGCAGCGTGCGCCGCCTGCAGCAACTGGGGAT GCGCGTGGCGCGGCTGGTCTCGCCGATCCTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AAACCTTCGCGAACTCTGTACGTCGGCAAAACCGCGTTGGAAACGGCTTCGGAAAGCTCGGTTGCCGTTCGGGGACTCCGCTTCCCCGTTCGTTTTCGCC CGGTTTCTCCAGCTCGCCAGTTCGTCGGCAGGTCCTGAGCGACGCCTCTGCCGCCCGCCGCCCGCGCGGGCGTGCAGCTTTTCCCTAGCCAGCGACTACA AAAATCATAATTTCGCTATTCCCCGGCTCTGAACAGAATGCGGCCATCACGCAACCGCAGAACAAGAACGACCAGAGTCCGAGGAACCGAGCCATGACCG ACCTGAATCGCACCGCCTTGCCCTCGCGCACGGACGGGACCGTGGAAAAGACCGACACCCTCGTCGTCGGCGCCGGCCAGGCCGGCGTGGCGATGAGCGA GCACCTGAGCCGGCTCGGCGTGCCGCACCTGGTCCTGGAGCGCAACCGCATCGCCGAGGCCTGGCGCAGCGGACGCTGGGATTCGCTGGTGGCCAACGGC
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| Amino Acid Sequence |
>cardiolipin synthetase
MTSTTYLGLLLVGIQVLGFVAAIHAVLTVRTAQGAIAWATSLVFMPYLTLLPYLVFGRSRFDAYIEARRQANREMHLAAAELDWRPWVEEALAARQVSGY KGLKALVRMTRTPTLANNRVRLLVNGEASFEAMFKAISAARQVILVQFFIVRDDALGQRLQQLLLERAANGVEVFFLYDAIGSHALPHRYVERLRQGGVQ MHGFSTGSGMLNRFQVNFRNHRKVVVVDGECGFVGGHNVGVEYLGEKPPLAPWRDTHMELRGPAVACLQESFAEDWYWATHSLPPLILPPQYDSEGALCQ VVASGPADAQETCSLFFVEMINAAHERVWITSPYFVPDEAVMAALRLAVLRGVDVRLLIPSRPDHRTVYAASSLYALEAIRAGVKVFRYQPGFLHQKVVL VDRDTAAVGSANLDNRSFRLNFEVMVVTVDEGFAGEVEAMLEADFAESLEFTPEDRRSVRRLQQLGMRVARLVSPIL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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