Strain | Pseudomonas aeruginosa strain FRD1 contig_08_scaffold03, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCTGGGCGGTGCGCGAGCTGCGTCTGCAGGTGGACCAACGAGGTACCGGCCTGGGCCCGGAGGTCCCGTCCCTGAGTGTCGGCCTGCCGGCCAGCGAACT GGTGTTCCTGGTGCGCGGCAGCCCGCCGTACCGGCTGGCGTTCGGCAAGCCCGGCGCGCAGTCGGCGGCGCTGCCGCTCGGCGTACTGATTCCCGGCTAT ACCGAGAGCAAGCGCGCCACCCTGGGTAGCGCCAGCCTGGGCGAACCGCTGGAGGTGGCCATGGCGGCCGCGGCGCCGGCACCGGGTAGCGACTGGAAGA AGATCGGCCTGTGGGCGGTACTTCTGCTGGGGGTCGCTCTGCTGGTAATAATGGCAATGAGCCTGCTGCGTTCCTCGCCGAACAAGCCATGAGCCGGTTC CGCGCTATGCTGTTCGGCTGAGGAGGCTTTACGACGGGCCCCGGGGCGCATGCCGACGACGCGGCGGCCCGACAATAAAAACAAATCACGGAGTAAGAGA
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DNA Sequence for Gene |
>UC33_RS19165
ATGATCAGAATGGCGCTCAAGCCACTGGTAGCGGCCTGCCTGCTGGCTTCGCTGTCCACCGCCCCGCAGGCTGCTCCTTCGCCCTATTCGACGCTGGTGG TGTTCGGCGACAGCCTCAGCGATGCCGGGCAGTTCCCCGATCCTGCCGGCCCCGCCGGAAGCACCTCGCGTTTCACCAACCGGGTCGGCCCGACCTACCA GAACGGCAGCGGCGAGATCTTCGGACCGACCGCGCCCATGCTGCTCGGCAATCAGCTCGGCATCGCCCCGGGCGACCTGGCTGCCTCGACCTCGCCGGTC AACGCCCAGCAGGGCATCGCCGACGGCAACAACTGGGCGGTGGGCGGCTACCGGACCGACCAGATCTACGACTCGATCACCGCGGCCAACGGCTCGCTGA TCGAGCGCGACAATACCCTCCTGCGCAGCCGCGATGGCTACCTGGTGGACCGTGCCCGCCAGGGCCTGGGTGCCGATCCGAACGCGTTGTACTACATCAC CGGCGGCGGCAACGACTTCCTCCAGGGGCGCATCCTCAACGACGTCCAGGCACAACAGGCCGCCGGTCGCCTGGTGGATAGCGTGCAGGCCCTGCAGCAG GCCGGCGCGCGCTACATCGTGGTCTGGCTGTTGCCCGACCTGGGCCTGACCCCGGCTACCTTCGGTGGTCCCTTGCAGCCTTTCGCCAGCCAACTCAGCG GCACGTTCAACGCCGAGCTGACCGCCCAGTTGAGCCAGGCCGGCGCCAACGTCATTCCGTTGAACATCCCGCTGCTGCTCAAGGAAGGCATGGCCAACCC GGCTTCCTTCGGCCTGGCCGCCGACCAGAACCTGATCGGCACCTGTTTCAGCGGCAACGGCTGCACCATGAACCCGACCTACGGGATCAACGGCAGCACG CCCGACCCGAGCAAACTGCTGTTCAATGACAGCGTGCACCCGACCATCACCGGCCAGCGCCTGATCGCCGACTACACCTATTCGCTGCTGTCGGCGCCCT GGGAGTTGACCCTGCTGCCGGAAATGGCCCACGGCACCCTGCGTGCCTACCAGGACGAACTGCGCAGCCAGTGGCAGGCGGACTGGGAGAACTGGCAGAA CGTCGGCCAGTGGCGCGGCTTCGTCGGCGGCGGTGGCCAGCGCCTGGACTTCGACTCCCAGGACAGCGCCGCCAGCGGCGACGGCAATGGCTACAACCTG ACCCTTGGCGGCAGCTACCGCATCGACGAGGCCTGGCGCGCCGGGGTCGCCGCCGGTTTCTACCGGCAGAAGCTGGAAGCCGGCGCCAAGGATTCCGACT ACCGGATGAACAGCTACATGGCCAGCGCCTTCGTGCAGTACCAGGAAAACCGCTGGTGGGCCGACGCGGCGTTGACCGGCGGCTACCTCGACTACGACGA CCTGAAGCGCAAGTTCGCCCTGGGCGGCGGCGAGCGCAGCGAGAAAGGCGACACCAACGGCCACCTGTGGGCGTTCAGCGCGCGCCTGGGCTACGACATC GCCCAGCAGGCCGACAGTCCCTGGCACCTGTCGCCGTTCGTCAGCGCCGACTATGCACGGGTCGAGGTCGACGGCTATTCCGAGAAGGGCGCCAGCGCCA GCGCGCTCGACTACGACGACCAGAAGCGCAGCTCGAAGCGCCTGGGCGCCGGCCTGCAAGGCAAGTACGCGTTCGGCAGCGATACCCAGCTGTTCGCCGA GTACGCCCACGAACGCGAGTACGAGGACGACACCCAGGACCTGACCATGTCCCTCAACAGCCTGCCGGGCAATCGCTTCACCCTCGAAGGCTACACCCCG CAGGACCACCTCAACCGCGTCTCCCTCGGCTTCAGCCAGAAGCTGGCACCGGAGCTGTCGCTGCGCGGCGGCTACAACTGGCGCAAGGGCGAGGACGATA CCCAGCAGAGCGTCAGCCTGGCGCTGAGCCTGGACTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGTAGCGGCGACCGGCGCCCGGGCGGCGCCGGTCGCGTTTCTCGCCGACGGAACGAACGGCGCGCGCCGGCATCAAGAGAGTAGTACCCCGCTGTTACTC GCCGCCCGGTCGACCGCCATACACTGCCGATCCGTTTCGTTCGAGGGAATCGCCCGATGAGTTTCAACACCGAAGTACAGCCCGGCATCTGCATGGAGCC GGACGCCATCACCCAGGAATACGTGTTCAACCACACCATGTTGCGGGTCAAGGATCCGAAGCGCTCGCTCGACTTCTACTCGCGGGTGCTCGGCATGCGC CTGCTGCGTCGCCTGGATTTCGAGGAAGGCCGCTTCTCCCTGTATTTCCTCGCCATGACCCGTGGCGAAGAAGTGCCTGATGCGGTCGACGAGCGCCAGC GATATACCTTCGGGCGCCAGTCGGTCCTCGAGCTGACCCACAACTGGGGCAGCGAGAGCGACGACAGCCAGTACCACAACGGCAACCAGGACCCGCGCGG
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Amino Acid Sequence |
>esterase
MIRMALKPLVAACLLASLSTAPQAAPSPYSTLVVFGDSLSDAGQFPDPAGPAGSTSRFTNRVGPTYQNGSGEIFGPTAPMLLGNQLGIAPGDLAASTSPV NAQQGIADGNNWAVGGYRTDQIYDSITAANGSLIERDNTLLRSRDGYLVDRARQGLGADPNALYYITGGGNDFLQGRILNDVQAQQAAGRLVDSVQALQQ AGARYIVVWLLPDLGLTPATFGGPLQPFASQLSGTFNAELTAQLSQAGANVIPLNIPLLLKEGMANPASFGLAADQNLIGTCFSGNGCTMNPTYGINGST PDPSKLLFNDSVHPTITGQRLIADYTYSLLSAPWELTLLPEMAHGTLRAYQDELRSQWQADWENWQNVGQWRGFVGGGGQRLDFDSQDSAASGDGNGYNL TLGGSYRIDEAWRAGVAAGFYRQKLEAGAKDSDYRMNSYMASAFVQYQENRWWADAALTGGYLDYDDLKRKFALGGGERSEKGDTNGHLWAFSARLGYDI AQQADSPWHLSPFVSADYARVEVDGYSEKGASASALDYDDQKRSSKRLGAGLQGKYAFGSDTQLFAEYAHEREYEDDTQDLTMSLNSLPGNRFTLEGYTP QDHLNRVSLGFSQKLAPELSLRGGYNWRKGEDDTQQSVSLALSLDF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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