Pseudomonas aeruginosa FRD1, UC33_RS16760
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain FRD1 contig_07_scaffold02, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGGGCACCAACAGGGTGTCCAGGCTTTCCGGCGGACAGTCGCGCCAGGCGAGGTCGGCGCAGATGCGGATGCCCGCGGAACTGGGCACCGCTTCGCTACG CTCGCCGAGCACCTGTATCCGGTAGAAAGGCGGCAGGCCCTGGCGCTGGCGTTCGACGTTGGCCGAGGCGAATACCTGCAGCGGTCCGGTCACGTCCAGG CTCATCACGTCGGGATAGATCAGGCAGGCAATCAGGCGCGGTTCGGGCATGGCACAACCTCATGGCGATGGCGGCAGTCTGGCGTCCTTCGGGCCTGGCC GCAATGCCAGTCGGCCCACGGATCTTGCCATTCCGCTCGCCCGGGGCGTCCCGCTGCGCCGATGGTTGGTATCGCCTCGGCACGCCGCATGCCCTATTGT CTGGTAACGGGTGATGGCTTTTTGACTCATCGCTGCAGAGGCGCCAGGGTATTGTCGTCCAGGCCTGTTTCAGCGTTCGGTCCGAGGTAGGGGAGTCAGC
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| DNA Sequence for Gene |
>UC33_RS16760
ATGCTTGCACGCGACAGCCTGGTACAGGCTGGTCTGCCGGATAATCCGTATGCGCGCCAGTTGCGCAACGGCTTTCGTTGGTTGCGGTTCGAAAAGGAGC TGGAAAACGAGTTTCGCGAGTTTCTCAGCTGGAACTCGCTGATGCAGCGGCGCGCTGCCATCGGGGTGGCGTTCCTGATCTGGGCGCTGTTCATCGTGGC CGACTGGATGATGGTGGACATCCGCCTGCACCCCAGCCTGTTCGAGCAACTGCTGGGCGTGCGCCTGGGAATGATCGGCCTGCTGCTGGTGGTCTGGCCG GCGGCCTTCCTGCCCAGCCTGCGCAAGGTCGGCGATGCCATCGCGCCCTACTGCCTGCTGCTGATCAACCTGGCGGTGCTGGCCTGCGACGTGCTGTTCG AGTGGCATGGGGTGCCGCGCTTCACCCAGCTGGGTGCGACCCTGGGCATCCTCGCGGTGTTCTTCCCGCTCGGCCTGGCGTTCTGGGCCTGCGTGCGCCT GGCGTTGCTGTGCCTGGCCCTGAACCTGGCGGTATTCCTGCTCTTCGGCGGCGAAGAGAACCTGCGCACCAACCTGCTGAATACGCTCTACAACGGCCTG GTGGTCCTGATCTGTTCGTTCGCCCTGTACCTGCAGGACTACGCCCAGCGCGAGCAGTTCCTCGGCCGGCGGCTGCTGGGCATGATGGCCGAACAGGACA GCCTCACCGGCCTGGTCAACCGGCGCTACTACGAGCTGCTCGCCCAGCGGGCCCTGGAGCAGGGCGCCCGCGAGGAAAAGGGGGTGGCGCTGATCCTGGT GGATGTCGACGACTTCAAGGCCTACAACGACCACTACGGGCATCCGGCCGGCGATGCCGCCCTGCGCCAGCTTGGCGTCGTGCTCCGGCAGGGCGCGCGG CGGCCGCTGGATATCGCCGCGCGCCTGGGCGGGGAGGAGTTCGCCGTGTTGCTCTACGACAGCGAGGAGGGCAACACCCTGGCCATCGCCGAGCGCCTGC GGCAGGCGGTGGAGGCGCTGGGCATCGAGCACCTGGGCTCCAGCGCCGGCCCCTGCCTGACCATTAGCCTGGGGGTGGCCTATTCGACCTCCGGCATGGG CCTGGACGCGCTCTATCGTGAGGCCGATCGTGCGCTCTACGAGGCCAAGGATGCAGGGCGCAACGCGGTGCGCGTGGCGTTCCGGCAGCACGATCGCCTC GAATAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGGAAACGAAAAAAGGCGCCCGTGGGCGCCTTTCGTCGTATGGAGCGGCTCAGCCTTGGCTGGGCATACTCCAGTCCTGCAGGTTGTAGCCGTTGTGGCT GAGTTCTTCGCGTGCCTGTTGCAGCAGGCCGGCAAGCTGCTCCGGATCGGAGTAGGCGGAGCTCGGAATGCGTGCACGGCCCAGCAGGCGGGTGCCGGTG CGATCGACTACGGACAGGCTCAGGCCGCCGTCACTGCCTAGCTCGGACCAGGCAACGCACTGGTATGGCTGGAAGGCGCGCCCGGTGATCAGCAAAGCCT CGTTGAAACGGAGCGTAGCGTTCATGGGAGTCGGTCTCTCTCGTTCATGTCTGTGTGGAACATGGGTGGCGCTTCCCGGCTCCACCGTGTTCGGTCACGC TAACTGATGCTTTCGAAAGCGAAAAAGTCACGGCGTGGCGCGTTTGTGCAACAGGTTGTCGCTTTTTCGAAGGGTTTAGGCGTGCCGAAGCGGCTAGGCG
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| Amino Acid Sequence |
>hypothetical protein
MLARDSLVQAGLPDNPYARQLRNGFRWLRFEKELENEFREFLSWNSLMQRRAAIGVAFLIWALFIVADWMMVDIRLHPSLFEQLLGVRLGMIGLLLVVWP AAFLPSLRKVGDAIAPYCLLLINLAVLACDVLFEWHGVPRFTQLGATLGILAVFFPLGLAFWACVRLALLCLALNLAVFLLFGGEENLRTNLLNTLYNGL VVLICSFALYLQDYAQREQFLGRRLLGMMAEQDSLTGLVNRRYYELLAQRALEQGAREEKGVALILVDVDDFKAYNDHYGHPAGDAALRQLGVVLRQGAR RPLDIAARLGGEEFAVLLYDSEEGNTLAIAERLRQAVEALGIEHLGSSAGPCLTISLGVAYSTSGMGLDALYREADRALYEAKDAGRNAVRVAFRQHDRL E
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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