Strain | Pseudomonas aeruginosa strain FRD1 contig_03_scaffold01, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGTCGGTCGGCTGGTGCGTTCCACCGACACCGCGCGCTTCGCCTCGACCCTGGCGATCCTCACCCGCAGCGGCGTGCCGCTGGTGGAGGCGCTGGCGATC GCCGCCGAGGTGATCGCCAACCGGATCATCCGCAACGAAGTGGTCAAGGCCGCGCAGAAGGTCCGCGAGGGCGCCAGCCTGACCCGCTCGCTGGAAGCCA CCGGGCAGTTTCCGCCGATGATGCTGCACATGATCGCCAGCGGCGAGCGCTCCGGCGAGCTGGACCAGATGCTGGCGCGCACCGCGCGCAACCAGGAGAA CGACCTGGCGGCGCAGATCGGCCTGATGGTCGGCCTGTTCGAACCGTTCATGCTGATATTCATGGGCGCGGTGGTGCTGGTCATCGTCCTGGCCATTCTT CTTCCGATCCTTTCTCTCAACCAACTCGTGGGGTAATCGCGTGAATCAGAGCCGCCCATTGCAGCGTCGCCAACAGTCGGGCTTCACCCTGATCGAAATC
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DNA Sequence for Gene |
>UC33_RS06425
ATGGTCGTGGTGGTCATCCTCGGCATCCTCGCCGCCCTGGTGGTGCCGCAGGTGATGAGCCGTCCCGACCAGGCCAAGGTCACCGTGGCCAAGGGCGACA TCAAGGCCATCGCTGCCGCGCTGGACATGTACAAGCTGGACAACTTCGCCTATCCGAGCACCCAGCAGGGCCTTGAGGCGCTGGTGAAGAAGCCCACCGG CAATCCGCAGCCGAAGAACTGGAACAAGGACGGCTACCTGAAGAAGCTGCCGGTCGATCCGTGGGGCAATCCCTACCAGTACCTGGCGCCGGGCGCCAAG GGCCCGTTCGACCTGTATTCGCTGGGCGCCGACGGCAAGGAAGGCGGCAGCGACAACGACGCCGACATCGGCAACTGGGACAACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCGGACATGCGGGCTTCGCGCGGCTTCACCCTCATCGAGCTGATGGTGGTGATGGTCATCATCAGCGTACTGATCGGCCTGGCGGTGCTCAGCACCGGCT TCGCCAGCACCTCGCGGGAGCTGGACAGCGAGGCCGAGCGGCTCGCCGGGCTGATCGGCGTGCTGACCGACGAGGCCGTGCTGGACAACCGCGAGTACGG CCTGCGCCTGGAGCGCGATGCCTACCAGGTACTGCGCTACGACGAAGCGAAGGCGCGCTGGTTGCCGGTGGCGCGCGACAGCCACCGCCTGCCGGAGTGG GCGGAGCTGACCTTCGAGCTGGACGGCCAGCCGCTGGTGCTGGCCGGCAGCAAGGGCGAGAAGGAGCAGAAGAAAGGCACCGACCAGCCGCAATTGCTGA TCCTCTCCAGTGGCGAACTCAGTCCGTTCCGCCTGCGCCTGGCCGAGCGCGGACCCGAGGGGCGGGCGTTGTCGCTGAGCAGCGACGGTTTCCGCCTGCC
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Amino Acid Sequence |
>secretion system protein G
MVVVVILGILAALVVPQVMSRPDQAKVTVAKGDIKAIAAALDMYKLDNFAYPSTQQGLEALVKKPTGNPQPKNWNKDGYLKKLPVDPWGNPYQYLAPGAK GPFDLYSLGADGKEGGSDNDADIGNWDN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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