Strain | Pseudomonas aeruginosa strain FRD1 contig_02_scaffold01, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGCGCCGCTGTTCAACGCCTGCACGATGTCCTGTTCGGCGTCACGGCTGGTCAGCATGATCGCCGGCGGCGGCGCATCCAGATGCTCGCGGCTCCAGCGC AGCAATTGCAGGCCGCTGAGGTCCGGCAACTGCCAGTCGAGGATCAGCAGGTCGAAGGTTTCCCGCTTGAGCTGCTTGAGCAGGTCCTCGCCACGGGCGA AACGGTGCACCGTCCAGGCCTGTTCGCCCTGCGCGGGTATCTGCTGCAAGGTCTGCTCGACCCGGTCCAGTTCGGCCGACTCGTCGTCCAGTATCGCGAC ACGCATAAAAGCTGGTCCTGTTCAATCGGGCTAACGCCCCTTTTTCGCTCCAGGAACGGCGAATTACGTACAAATCTGAAGAATTGTGACGAATCTCTCT GGTCGCGACCAGCCCTTGATAGCCTGATTCCAAATAGCCATTAAGCGGGACGAAGAGCCCGTGAGCCAGCGCCAGCCTGACCTATCAAGGAGTCGTAGCC
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DNA Sequence for Gene |
>UC33_RS01280
ATGGGTTTCCGGCCAGTTAGCCAACGTTTGCGTGACATCAACCTGCAGGCCCTCGGCAAGTTTTCCTGCCTTGCCCTGGTCCTCGGCCTGGAATCGGTAA GCCATCCGGCCGGCCCGGTCCAGGCCCCCTCGTTCAGCCAGGGCACCGCCAGCCCGTCCTTCGCTACTCCGCTCGGCCTCGACGGCCCGGCCCGCGCCAG GGCCGAGATGTGGAACGTCGGCCTGTCCGGCGCCGTCAGCGTGCGTGACGAGTTGCGCTGGGTGTTTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACGCGACGAATCTGAAATAGCGCGGAAGAATCTGAAGAAATATGGCAAATCTCACAGCAGACAAATCGCGCTTGGTAGATTTCCAACCGCTGAGTAGGCC AAGGAGCAAATGGATTGCTCCGACACAGGGATGTGTAAACCCGCTCCGGCGGGCCGTGGAACGAGACCACTCGAACCACAGTCAGGGGTCGGTAACGGAC GATCGCCCCAGGCAACCGAGCCAATCCCCCCAGGGCTGGCTTCGACACACGGATGTGTCATCTCCCCTTCCTTGTTCGAATCATCCCCTCCCGCTATCCG GACGCCTCGATCCGCGTCCCATCCTGGATCTGAAAAGGACCTCATCATGAAGCAATACGGAGCAGAGTTCTTCGGCACCTTCTGGCTGGTATTGGGCGGC TGCGGCAGCGCAGTACTCGCTGCCGGCGTACCGGAACTGGGAATCGGCTACCTCGGCGTGGCCCTGGCGTTCGGCCTCAGCGTGCTGACCATGGCCTATG
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Amino Acid Sequence |
>hypothetical protein
MGFRPVSQRLRDINLQALGKFSCLALVLGLESVSHPAGPVQAPSFSQGTASPSFATPLGLDGPARARAEMWNVGLSGAVSVRDELRWVF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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